Pairwise Alignments

Query, 329 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 330 a.a., site-specific tyrosine recombinase XerC from Sinorhizobium meliloti 1021

 Score =  100 bits (250), Expect = 4e-26
 Identities = 87/298 (29%), Positives = 135/298 (45%), Gaps = 16/298 (5%)

Query: 16  LPRERRASVHTCDAYAYSFQLLVTFAARRLSKRPCLLQIEDIDVPMILAFLEHIEETRGN 75
           L  ERR S  T DAY    +  +TF    L+  P L  I  +    +  FL       G 
Sbjct: 42  LAEERRLSEKTVDAYERDTRQFLTFLTGHLAGPPRLSDICALRPADLRGFLAQ-RRKGGA 100

Query: 76  KARSRNARLAAVKSFFRYLEHRVPAVLDQALRVHAMPMKKIDEALVASLSRTEVQALLNA 135
            AR+    LA ++SF RYLE      L  A    A+   K  ++L  +L+  E   ++ A
Sbjct: 101 GARTLGRGLAGLRSFLRYLERNG---LANAAGAGAVRSPKQPKSLPKALTDREALKVVTA 157

Query: 136 PDRRSLS---GIRDRAMLHLAFAGGLRVSELVGLTLDQFDGRSPASIHIIGKGRRERVLP 192
             + +       R+ A+L L +  GLR++E + LT   F G    S+ + GKG + R++P
Sbjct: 158 DAQLAEEPWIAARNAAVLTLLYGCGLRIAEALDLTPADFSG-PVTSLRVTGKGGKTRIVP 216

Query: 193 LWQETAAAIRAWIAVRPKN--GDTALFLNNAGRMMTRSGFEYILEKHAAAAVSVAPTLAT 250
           +    A A+  +  + P +   +  +F    G  +  +  +  ++K  AA          
Sbjct: 217 MIAAAAEAVETYRKLCPYHIEPEEPIFRGARGAKLQPAIIQREMQKLRAALG------LP 270

Query: 251 KSISPHVLRHSCAMHMLQATRDIRKVALWLGHASLQSTEIYLRADPTEKLEMLDALAP 308
            S +PH LRHS A H+L    D+R +   LGHASL +T++Y   D    LE+ D   P
Sbjct: 271 DSATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVDSARLLEIYDRAHP 328