Pairwise Alignments

Query, 329 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 300 a.a., Tyrosine recombinase XerC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  105 bits (263), Expect = 1e-27
 Identities = 90/307 (29%), Positives = 144/307 (46%), Gaps = 20/307 (6%)

Query: 4   LAQHLTAFLREHLPRERRASVHTCDAYAYSFQLLVTFAARRLSKRPCLLQIEDIDVPMIL 63
           L+Q ++ FLR +L  ER+ S  T   Y      ++  A     K       +  D  ++ 
Sbjct: 6   LSQDVSRFLR-YLGVERQLSPITLLNYQRQLDAIIALAGETGLK-----SWQQCDAAIVR 59

Query: 64  AFLEHIEETRGNKARSRNARLAAVKSFFRYLEHRVPAVLDQALRVHAMPMKKIDEALVAS 123
           +F       +G    S   RL+A++SFF +L  +     + A  V A    K    L  +
Sbjct: 60  SFAVR-SRRKGLGPASLALRLSALRSFFDWLVSQGELKANPAKGVSA---PKAPRHLPKN 115

Query: 124 LSRTEVQALLNAPDRRSLSGIRDRAMLHLAFAGGLRVSELVGLTLDQFDGRSPASIHIIG 183
           +   +V  LL+  D      +RDRAML + +  GLR+SELVGL +   D      + ++G
Sbjct: 116 IDVDDVNRLLDI-DLNDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHLD-LDTGEVWVMG 173

Query: 184 KGRRERVLPLWQETAAAIRAWIAVRP--KNGDTALFLNNAGRMMTRSGFEYILEKHAAAA 241
           KG +ER LP+ +     I  W+ +R    + + ALFL+  G+ ++    +   ++ A   
Sbjct: 174 KGSKERRLPIGRNAVTWIEHWLDLRGLFASDEEALFLSKLGKRISARNVQ---KRFAEWG 230

Query: 242 VSVAPTLATKSISPHVLRHSCAMHMLQATRDIRKVALWLGHASLQSTEIYLRADPTEKLE 301
           +          + PH LRHS A HML+++ D+R V   LGHA+L +T+IY   D      
Sbjct: 231 IKQG---LNSHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLAS 287

Query: 302 MLDALAP 308
           + DA  P
Sbjct: 288 VYDAAHP 294