Pairwise Alignments

Query, 329 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

Subject, 301 a.a., tyrosine recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 18/219 (8%)

Query: 84  LAAVKSFFRYLEHRVPAVLDQALRVHAMPMKKIDEALVASLSRTEVQALLNAPDRRSLSG 143
           ++ VK+FF+++ +      D A+ + A    K+   L  +LS  E+  LL      +  G
Sbjct: 79  ISGVKAFFKFMVYEDKLEEDPAILLEA---PKLGRKLPDTLSYEEIVKLLEGIKLGTPEG 135

Query: 144 IRDRAMLHLAFAGGLRVSELVGLTLDQFDGRSPASIHIIGKGRRERVLPLWQETAAAIRA 203
            R+RAML + ++ GLRVSELV L L          + I+GKG +ER++P+ ++    ++ 
Sbjct: 136 HRNRAMLEVLYSSGLRVSELVELKLGMVYS-DIGFLRILGKGNKERLVPVGKDALRYLKL 194

Query: 204 WI-------AVRPKNGDTALFLNNAGRMMTRSGFEYILEKHAAAAVSVAPTLATKSISPH 256
           ++        + P + +  +FLN  G+ MTR    +I  K     V +      K +SPH
Sbjct: 195 YLDEVRNHQKIAPGH-EEYVFLNRRGKKMTRV-MVFIFIKKLVEEVGIK-----KKVSPH 247

Query: 257 VLRHSCAMHMLQATRDIRKVALWLGHASLQSTEIYLRAD 295
             RHS A H+++   D+R V   LGH S+ +TEIY   D
Sbjct: 248 TFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTHLD 286