Pairwise Alignments

Query, 545 a.a., Transposase from Sinorhizobium meliloti 1021

Subject, 583 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  261 bits (668), Expect = 4e-74
 Identities = 171/528 (32%), Positives = 261/528 (49%), Gaps = 37/528 (7%)

Query: 32  AKMSATLQAHDQLIG-------ELRLRIAKLKKQVFGKSSEKIEREIQQL-ELALEDLLI 83
           A+  A LQ  D+ I        ++   +A+LK+  FG  SE +  E ++L E  L +   
Sbjct: 64  AERDALLQRKDREIALREAKIEKITFELARLKRWKFGAKSEAMNAEQRRLFEETLAEDEA 123

Query: 84  AAAENSTKPLDEVDAAVPAAPVASRPEKTMRRRPRVSE-----KAARERKELDPGTCC-P 137
              E   +   E  AA  AA  +    K   RRPR +      +      E +   C  P
Sbjct: 124 GLREQLERLRREAAAAAAAAAASDTTTKAPSRRPRRNPFPDHLRRVEHHHEPERTDCLEP 183

Query: 138 DCGGELRLVGEDASEILDMIAAQMKVIEVARLKKSCRCCEKMVQLPAPSRPIPGSMAGAG 197
            CG  +  +G++ SE LD++ A+  V      K +CRCC+ + Q P+ +  I G +A +G
Sbjct: 184 GCGRPMTRIGQEVSERLDIVPAEFFVHRHIYGKWACRCCQVLRQAPSVAEVIEGGIAASG 243

Query: 198 LLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTLVDWCGRAMQVLQPLIERIEAVVMSS 257
            +A+ L+S+F DH+P YR   I AR G   P STL    G+A   LQPL E     ++S 
Sbjct: 244 FVAHTLISRFVDHMPYYRQTTINARSGVHTPRSTLASITGQAGAALQPLHEAHRRFILSC 303

Query: 258 DLLHADDTPIRVLDRSLRDKGLGKGVKKGRIWTYVRDQRPWAGAAPPGAVYYFAPDWKEE 317
            +LHAD+TP+     SL D G GK  ++  +W Y R    W    P G +Y F P    +
Sbjct: 304 AVLHADETPV-----SLLDPGAGK-TRRAYVWAYARS---WHDKVP-GVIYEFCPGRGAQ 353

Query: 318 HV-------HHHLRQTSGILQADGYKGYGKLYEPGA--DGIGRFREAACWAHWRRDFHDI 368
           +          H R+ SG L +D Y  Y  + +P    D +G    AAC AH RR+F ++
Sbjct: 354 YPLAFLGGRERHGRRWSGTLLSDRYSAYETVVDPRLYPDRLG----AACAAHARRNFEEL 409

Query: 369 WTSNKSEIAREALDRIGALYDIERDIAGQPADIRLAARQKHSTAKVEALRVWAEAQLTRI 428
                S +  EA+ R   +Y +E  +     D R A RQ+ +    E L+ W + +   +
Sbjct: 410 THDGTSVVGLEAVRRFARIYGVEAQLQDLSDDDRRAQRQQLARPLWEELKHWLQLERRLV 469

Query: 429 PGKGDLASAFRYGLSRWHSFCLFLEDGRVAMDNNAAERALRPIGIGRKNWLFAGADTGAE 488
              G  A A  Y L  W +    L DG VA+DNN  ER ++P  +GR+ W+F G++   +
Sbjct: 470 ADGGPTAKAIDYTLGHWTALTRHLNDGAVAIDNNHLERQIKPWAMGRRAWMFVGSELAGQ 529

Query: 489 TLARAMTIIETAKMNGIDPQAYLADVLDRIHDHKINRLDELLPWNWAP 536
             A  M+++++A++NG DP AYL DVL R+   + +++++LLP  W P
Sbjct: 530 RAAIVMSLVQSARLNGHDPWAYLRDVLQRLPTQRASQIEDLLPHRWQP 577