Pairwise Alignments

Query, 545 a.a., Transposase from Sinorhizobium meliloti 1021

Subject, 510 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  286 bits (733), Expect = 1e-81
 Identities = 182/530 (34%), Positives = 264/530 (49%), Gaps = 29/530 (5%)

Query: 16  DPAFLKAMIAA-LQAENAKMSATLQAHDQLIGELRLRIAKLKKQVFGKSSEKIEREIQQL 74
           +P  L ++ A  L+   A++   ++    L+ +L    A LK+  F   SE+   E + L
Sbjct: 4   EPQSLDSLSAEQLRELTARLMVQVRHQSALLEKLTHENALLKRMKFAAQSERFNPEQKSL 63

Query: 75  ELALEDLLIAAAENSTKPLDEVDAAVPAAPVASRPEKTMRRRPRVSEKAARERKELDPGT 134
              LED + A   +      E+DA       A+  +K  +R P  +    RE +     T
Sbjct: 64  ---LEDEIEA---DLAAVASEIDALTQTQAPATPDKKQAKRLPLPAHLPRREVRHEPAST 117

Query: 135 CCPDCGGELRLVGEDASEILDMIAAQMKVIEVARLKKSCRCCEKMVQLPAPSRPIPGSMA 194
            C  CG +++ VGED +E LD +     V    R K +C  CE + Q P  +  I   + 
Sbjct: 118 TCA-CGCQMKRVGEDVAEKLDYMPGVFSVERHIRGKWACARCESITQAPVEAHVIDKGIP 176

Query: 195 GAGLLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTLVDWCGRAMQVLQPLIERIEAVV 254
             GLLA +LV K+ DHLPLYR   IF R G  IP STL  W G     LQPL++ ++  +
Sbjct: 177 TTGLLAQVLVGKYADHLPLYRQEAIFGRAGLAIPRSTLAQWVGTCGVRLQPLVDALKTEI 236

Query: 255 MSSDLLHADDTPIRVLDRSLRDKGLGKGVKKGRIWTYVRDQRPWAGAAPPGAVYYFAPDW 314
           +   +LHAD+TP+ +L       G GK   +  +W Y     P A  +    VY F    
Sbjct: 237 LGHRVLHADETPVAMLK-----PGDGK-THRAYLWAYA----PGAFESIKAVVYDFCESR 286

Query: 315 KEEHVHHHL-----RQTSGILQADGYKGYGKLYEPGADGIGRFREAACWAHWRRDFHDIW 369
             EH  H L     +   G L  D + GY  L   G   +G      C AH RR F D+ 
Sbjct: 287 SGEHARHFLGHGTDKAWKGSLTCDDFSGYKALIASGVTEVG------CLAHARRKFFDLH 340

Query: 370 TSNKSEIAREALDRIGALYDIERDIAGQPADIRLAARQKHSTAKVEALRVWAEAQLTRIP 429
            +N+S+IA  AL +   +Y+IER++    ++ R A RQ+ +   ++AL  W   Q  ++P
Sbjct: 341 AANQSQIAEFALQQFARVYEIEREVKELGSEQRQAVRQQQTRPILDALHEWMTLQRRQVP 400

Query: 430 GKGDLASAFRYGLSRWHSFCLFLEDGRVAMDNNAAERALRPIGIGRKNWLFAGADTGAET 489
                A A  Y L RW +   F +DG++ +DNN  E  +RPI IGR NWLFAG+    + 
Sbjct: 401 DGSATAKALDYSLRRWDALTRFADDGQLPVDNNWIENQIRPIAIGRNNWLFAGSLRAGQR 460

Query: 490 LARAMTIIETAKMNGIDPQAYLADVLDRIHDHKINRLDELLPWNWAPVAI 539
            A  M++I++A+MN  DP AYL DVL R+  HK +R+DELLP  W P  +
Sbjct: 461 AAAVMSLIQSARMNEHDPYAYLKDVLTRLPTHKASRIDELLPHRWQPTGL 510