Pairwise Alignments

Query, 545 a.a., Transposase from Sinorhizobium meliloti 1021

Subject, 246 a.a., transposase number 3 for insertion sequence ISRM28 from Sinorhizobium meliloti 1021

 Score =  105 bits (263), Expect = 1e-27
 Identities = 86/235 (36%), Positives = 117/235 (49%), Gaps = 35/235 (14%)

Query: 13  LPDDPAFLKAMIAALQAENAKMSATLQAHDQLIGELRLRIAKLKKQVFGKSSEKIER-EI 71
           LP D A L  +I +L AENA              +L+ R+A L+ Q+FG  SEK+   + 
Sbjct: 8   LPQDAAQLSRIILSLDAENA--------------DLKARVAFLEGQLFGPKSEKMTAIDP 53

Query: 72  QQLELALEDLL-IAAAENSTKPLDEVDAAVPAAPVASRPEKTMRRRP-----RVSEKAAR 125
            Q  L L DL  I  A N     D+V      APVA  P +  RR P     R+ +   R
Sbjct: 54  TQATLELGDLSDIPEAAN-----DDV------APVAEGPRQE-RRSPSRNIGRLPKHLPR 101

Query: 126 ERKELDPGT-CCPDCGGELRLVGEDASEILDMIAAQMKVIEVARLKKSCRCCEKM-VQLP 183
             + ++P +  CP C  EL  +G D SE LD++ A ++V    R + +CR CE + VQ P
Sbjct: 102 YEELIEPESKICPCCSFELHCIGTDISEALDIVPAVVRVKRTIRPRYACRACESVIVQAP 161

Query: 184 APSRPIPGSMAGAGLLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTLVDWCGR 238
           AP+R + G M      A+I VSKF  HLPL+R  ++ A  G  I   TL  W  R
Sbjct: 162 APARMMDGGMVTTAFAAHIAVSKFAWHLPLHRQAQMLASCGVIIDRGTLGAWVTR 216