Pairwise Alignments

Query, 545 a.a., Transposase from Sinorhizobium meliloti 1021

Subject, 550 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  290 bits (743), Expect = 7e-83
 Identities = 204/545 (37%), Positives = 278/545 (51%), Gaps = 34/545 (6%)

Query: 12  NLPDDPAFLKAMIAA---LQAENAKMS---ATLQAHDQLIGELRLRIAKLKKQV------ 59
           NLP  P  +KA  A    L  E A      A +   D  I EL+  + KL+ QV      
Sbjct: 12  NLP--PEVVKAFAAMQFELSVERAARQHEQAVVAEKDAFIAELKELVEKLEGQVHDYRRT 69

Query: 60  -FGKSSEKIEREIQQLELALEDLLIAAAENSTKPLDEVDAAVPAAPVASRPEKTMRRRPR 118
            FG  SEK++    Q+ELALEDL  A AE   + +  V+  + A+  AS PEK   R+ R
Sbjct: 70  KFGPKSEKLDPA--QMELALEDLETAIAETQAR-IAAVEKKIEAS--ASDPEKVAPRKER 124

Query: 119 ----VSEKAARERKELDPGTCCPDCG-GELRLVGEDASEILDMIAAQMKVIEVARLKKSC 173
               + E   R  + ++P +    CG G +  +GED +E LD + A+ +VI   R K +C
Sbjct: 125 KARALPEHLPRVERVIEPESIVCPCGCGNMVRIGEDRTERLDRVPARYEVIVTIRPKYAC 184

Query: 174 -RCCEKMVQLPAPSRPIPGSMAGAGLLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTL 232
            +    +VQ  AP+  + GS     LLA I VSK  +H+PL R  E+ AR G  I  + L
Sbjct: 185 PKGRTGVVQARAPAHLLEGSWPTEALLAEIAVSKHSEHMPLNRQAEVMARHGVPIDRTVL 244

Query: 233 VDWCGRAMQVLQPLIERI-EAVVMSSDLLHADDTPIRVLDRSLRDKGLGKGVKKGRIWTY 291
            DW GR    + P+++ + + ++  S  L+ D+T   VLD      G GK  K G +W  
Sbjct: 245 ADWMGRTGAAIAPVVDHMAKRLLWESTRLYVDETTAPVLD-----PGRGK-TKTGYLWAV 298

Query: 292 VRDQRPWAGAAPPGAVYYFAPDWKEEHVHHHLRQTSGILQADGYKGYGKLYEPGADGIGR 351
           +RD R W G+APPG V+++ P  K E+    L   +G +Q D Y GY  L      G   
Sbjct: 299 LRDDRGWNGSAPPGVVFHYRPGRKGEYAAEILDGFNGTIQVDAYGGYSHLATLDRVGGDP 358

Query: 352 FREAACWAHWRRDFHDIWTSNKSEIAREALDRIGALYDIERDIAGQPADIRLAARQKHST 411
            + A CWAH RR        + S I  EAL RI ALY IE  I G   + R A RQ  S 
Sbjct: 359 LKLAFCWAHGRRKLIKATPKSGSPIVDEALVRIAALYKIEDSIRGSDPEHRRAVRQDLSL 418

Query: 412 AKVEALRVWAEAQLTRIPGKGDLASAFRYGLSRWHSFCLFLEDGRVAMDNNAAERALRPI 471
             V A   W  AQ  R+  K DL  A  Y L+R   F LFL+DG V +D+N  E A+R  
Sbjct: 419 PLVGAFFAWLAAQAKRVSRKSDLGKALAYMLTRQDGFRLFLDDGHVDIDSNLVENAIRRP 478

Query: 472 GIGRKNWLFAGADTGAETLARAMTIIETAKMNGIDPQAYLADVLDRI-HDHKINRLDELL 530
            + R+N LFAG D G    AR  ++I T KMNG++P AYL D+  R+ + H    +D L+
Sbjct: 479 AMNRRNALFAGHDEGGRNWARFASLIGTCKMNGVEPYAYLCDLFTRLANGHLAKDIDALM 538

Query: 531 PWNWA 535
           PW +A
Sbjct: 539 PWAYA 543