Pairwise Alignments

Query, 545 a.a., Transposase from Sinorhizobium meliloti 1021

Subject, 510 a.a., transposase from Pseudomonas putida KT2440

 Score =  222 bits (566), Expect = 2e-62
 Identities = 169/543 (31%), Positives = 258/543 (47%), Gaps = 49/543 (9%)

Query: 6   MSNASQNLPDDPAFLKAMIAALQAENAKMSATLQAHDQLIGELRLRIAKLKKQVFGKSSE 65
           M +   NLPDDPA LK ++A L AE              I +L+ ++  L+ ++F + SE
Sbjct: 1   MISVPDNLPDDPAALKLLLAQLLAERTVDKGQ-------IVDLKEQVKLLRDRLFNRKSE 53

Query: 66  K-IEREIQQLELALEDLLIAAAENSTKPL-DEVDAAVPAAPVASRPEKTMRRR-PRVSEK 122
           + +E    QL L  E       E+   P  D+ D  V A        K +    PR+   
Sbjct: 54  QTVESNTPQLALFNEP------ESQWVPTADDADEEVVAPSKQRGKRKPLSADLPRIEVI 107

Query: 123 AARERKELDPGTCCPDCGGELRLVGEDASEILDMIAAQMKVIEVARLKKSCRCCEKM-VQ 181
                 EL   TC   CG    +VGE  SE LD++  Q++V++  R    CR CE   V 
Sbjct: 108 HDLPEHEL---TCA--CGCRKHVVGEQTSEQLDIVPMQIRVLKHVRKIYGCRGCETAPVT 162

Query: 182 LPAPSRPIPGSMAGAGLLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTLVDWCGRAMQ 241
              P++ I  SMA   +LA +L +K+ D LPL+R   +  R G +IP  TL  W  +  +
Sbjct: 163 ADKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLNRHGIEIPRQTLARWVIQCSE 222

Query: 242 VLQPLIERIEAVVMSSDLLHADDTPIRVLDRSLRDKGLGKGVKKGRIWTYVRDQRPWAGA 301
             QPL+  +   ++ S ++H D+T ++VL    RD          + W +V+       +
Sbjct: 223 HFQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDP-------TSQSWMWVQ------AS 269

Query: 302 APPG---AVYYFAPDWKEEHVHHHLRQTSGILQADGYKGYGKL-YEPGADGIGRFREAAC 357
            PP     ++ +     +E     L    G +  D Y GY  L  +PG + +      AC
Sbjct: 270 GPPDRQVVLFDYTTSRAQEVPLRLLEGYRGYVMTDDYAGYNALALQPGVERL------AC 323

Query: 358 WAHWRRDFHD---IWTSNKSEIAREALDRIGALYDIERDIAGQPADIRLAARQKHSTAKV 414
            AH RR F +   +    KS  A  AL  I  LY IERD+     + R   RQ+ S   +
Sbjct: 324 MAHVRRKFVEAQKVQPKGKSGRADVALTMINKLYGIERDLKDASDEQRFIGRQERSLPIL 383

Query: 415 EALRVWAEAQLTRIPGKGDLASAFRYGLSRWHSFCLFLEDGRVAMDNNAAERALRPIGIG 474
           E L+ W +   +++  +  L  A  Y  + W+    ++E G + +DNN AERA++P  IG
Sbjct: 384 EQLKSWLDKTHSQVTPQSVLGKAVLYLANNWNRLERYVEAGHLPIDNNLAERAIKPFVIG 443

Query: 475 RKNWLFAGADTGAETLARAMTIIETAKMNGIDPQAYLADVLDRI-HDHKINRLDELLPWN 533
           RK WLF+    GA   A+  +++ETAK+NG +P  +L  VL+R+ H   +   + LLPWN
Sbjct: 444 RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPHASSVADYEALLPWN 503

Query: 534 WAP 536
            +P
Sbjct: 504 CSP 506