Pairwise Alignments

Query, 545 a.a., Transposase from Sinorhizobium meliloti 1021

Subject, 511 a.a., transposase from Pseudomonas putida KT2440

 Score =  295 bits (755), Expect = 3e-84
 Identities = 185/529 (34%), Positives = 268/529 (50%), Gaps = 24/529 (4%)

Query: 8   NASQNLPDDPAFLKAMIAALQAENAKMSATLQAHDQLIGELRLRIAKLKKQVFGKSSEKI 67
           N  Q  P+    L A    LQ++   MS  +Q  + LI + +  IA LK+  F K SE+I
Sbjct: 6   NLDQMTPEQLRALAAQALQLQSQVEAMSKKIQNDEILIEQFKFEIALLKRHKFAKRSEQI 65

Query: 68  EREIQQLELALEDLLIAAAENSTKPLDEVDAAVPAAPVASRPEKTMRRRPRVSEKAARER 127
                 L   L D  + A E   K L      +PA+  A  P ++ +R P   +      
Sbjct: 66  SPAQGSLLDDLLDTDLEAIEAELKQL------LPASSQAE-PRQSPKRAPLPPQFPRTVI 118

Query: 128 KELDPGTCCPDCGGELRLVGEDASEILDMIAAQMKVIEVARLKKSCRCCEKMVQLPAPSR 187
           +     T C  CG +L+ +GED SE LD       V    R K +CR CE ++Q P P++
Sbjct: 119 RHEPENTQCA-CGCQLQRIGEDVSEKLDYTPGVFTVEHHVRGKWACRQCETLIQAPVPAQ 177

Query: 188 PIPGSMAGAGLLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTLVDWCGRAMQVLQPLI 247
            I   +  AGLLA+++V+KF DHLPLYR  +IF R G  I  STL  W G+    LQPL+
Sbjct: 178 VIDKGVPTAGLLAHVMVAKFADHLPLYRQEKIFGRAGLAIARSTLAQWVGQTGVRLQPLV 237

Query: 248 ERIEAVVMSSDLLHADDTPIRVLDRSLRDKGLGKGVKKGRIWTYVRDQRPWAGAAPPGAV 307
           + +   V++  ++HAD+TP+++L          K   +  +W Y     P++  A    V
Sbjct: 238 DALREAVLNQGVIHADETPVQMLAPG------EKKTHRAYVWAY--STTPFS--ALNAVV 287

Query: 308 YYFAPDWKEEHVHHHLRQTSGILQADGYKGYGKLYEPGADGIGRFREAACWAHWRRDFHD 367
           Y F+P    EH  + L   +G L  D + GY   +E G   IG      C AH RR F D
Sbjct: 288 YDFSPSRAGEHARNFLGDWNGKLVCDDFAGYKAGFEQGITEIG------CMAHARRKFFD 341

Query: 368 IWTSNKSEIAREALDRIGALYDIERDIAGQPADIRLAARQKHSTAKVEALRVWAEAQLTR 427
           +  +NKS++A +AL  I  LY++ER       + R   RQ+ +   ++ L  W  AQ   
Sbjct: 342 LHVANKSQLAEQALHSISGLYEVERQARDMSDEDRWRIRQEMAVPILKTLHDWMLAQRDL 401

Query: 428 IPGKGDLASAFRYGLSRWHSFCLFLEDGRVAMDNNAAERALRPIGIGRKNWLFAGADTGA 487
           +P     A A  Y L RW +   +L+DG V +DNN  E  +RP  +GR NWLFAG+    
Sbjct: 402 VPNGSATAKALDYSLKRWVALTRYLDDGAVPIDNNQVENQIRPWALGRSNWLFAGSLRSG 461

Query: 488 ETLARAMTIIETAKMNGIDPQAYLADVLDRIHDHKINRLDELLPWNWAP 536
           +  A  M++I++A+MNG DP AYL DVL R+   + + + +LLP  W P
Sbjct: 462 KRAAAIMSLIQSARMNGHDPYAYLKDVLTRLPTQRASEIGQLLPHQWVP 510