Pairwise Alignments

Query, 339 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 363 a.a., ABC transporter, substrate-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) from Variovorax sp. SCN45

 Score =  102 bits (254), Expect = 1e-26
 Identities = 93/335 (27%), Positives = 145/335 (43%), Gaps = 26/335 (7%)

Query: 1   MSTSITRRTAILGSMGAFLLSALDRTFAAGPTSLKIALVLESR-TDIGWTRTLLDALEQV 59
           M  ++  R  ++ +   FL  A    F+     LKI  V  +  TD GW R   +  + V
Sbjct: 1   MYKNLAGRAVLVWAAACFLSPA----FSQPQVPLKIGFVYVTPVTDAGWVRQHEEGRKAV 56

Query: 60  KQARPDGLDISWEYTDPLWNDDAENAMRFYAEGGEYDIIWAHGRYSDQVKKLSAEFPDIM 119
           + A  D +  ++   +     DAE  +R  A+ G   I      Y +   K++ +FPD+ 
Sbjct: 57  EAALGDKVKTTY-VENVSEGADAERVIRDLAQQGNRLIFTPSFGYMEPTLKVAKDFPDVK 115

Query: 120 FV-VTGSGNLPLGANQYWLYKRLHEPSYLLGMLAGRTTKSGVVGLVGTFAADDVNDQINA 178
           F  +TG    P   N      R +E  YL G+ AGR TK+ V G V  F   +V   INA
Sbjct: 116 FESITGYKTAP---NVATANARYYEGRYLAGIAAGRMTKTNVAGYVAGFPIPEVLQGINA 172

Query: 179 FLDGARSVRPDVRHRVSFIGSWSDNALAAEHANVQIASGADVVFMLTDN---FKPCQEHR 235
           F  G RSV P+ +  V ++  W D     + A       ADVV   T +       QE  
Sbjct: 173 FTLGMRSVNPNAKVHVVWLNEWFDPPKERDAAMALFNQNADVVAFHTGSTAVMSAAQERG 232

Query: 236 IICFANINDQSKLAPDAIASSAIIDWQPDIKWIISEWLKHKAGAPYDGNTEP--KWFSMS 293
            +  A  +D  K+APDA   +    W          +   +A A  DG  +    W  + 
Sbjct: 233 KLAIAYHSDMRKIAPDAQIVAVTHQW--------GGYYTQRAKAVLDGTWKSGNLWGGVK 284

Query: 294 QGGVDIAPYHDFDAKLPVAVKEELAATRQKIISGE 328
           +G + +    DF +K+P  V++E+ A ++ I +G+
Sbjct: 285 EGMIRVG---DFGSKVPKTVQDEVLARQKDIAAGK 316