Pairwise Alignments

Query, 516 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 516 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

 Score =  270 bits (691), Expect = 7e-77
 Identities = 171/481 (35%), Positives = 258/481 (53%), Gaps = 16/481 (3%)

Query: 4   LLSVQNLTKRFGAVTANDSVDLDVRKGEIHCLFGENGAGKSTLSACLYGYYRADSGVIRF 63
           LL ++++ K FGAVT    V L  R G++H + GENGAGKSTL   L G +  D G IR 
Sbjct: 17  LLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGEIRI 76

Query: 64  KGQVAELNSPADALRLGIGMVHQHFVLVENFTVLENIIVG-SPDVGMLLSKSTARQKVED 122
            G+      P+ A + GI ++HQ   L+ + TV +NI +G  P    ++ +       E 
Sbjct: 77  GGRPVRFGHPSAARQAGIAIIHQELALLPHRTVAQNIFLGHEPSRWGVIDRKAMNAGAEA 136

Query: 123 LCLRCGIELDLDREIWQLSVGEQQWVEILKALYFGAELLILDEPTAVLTPQQSDQLFVIL 182
              R G  +D   E  +LSV EQQ VEI KA+   A +L+LDEPTA L   +S +LF ++
Sbjct: 137 ALRRVGCRIDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVESRKLFDLI 196

Query: 183 DGMRRQGLSIILISHKLREVMQ-SDRVTILRKGKVVATVETATTTAESITALMVGHQVTK 241
             +RR G++++ ISH++ EVM  +D +++++ G+++AT+  A  T E I  LMVG +++ 
Sbjct: 197 AELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRLMVGRELSD 256

Query: 242 RVSDRSV-APGREVLVVDHAVAIGEWGEEVLCDINFTIAENEILGLAGVAGNGQKELFEV 300
                +   PG EV  V+      + G EVL  I+  +   EI+G+AG+  +G+ EL   
Sbjct: 257 FYPPAAANPPGAEVFAVE------QGGNEVLHGIDLRLHAGEIVGVAGLEASGKVELARA 310

Query: 301 LMGVRTLSSGRFHLNGEAIVAPTSREMLDRGVGLVPDDRFREGLISEFGTAENLVLGWQR 360
           L G R  + G      +   A + RE   RG+G +PDDR REGL  +    +N  L  + 
Sbjct: 311 LFGERRFTRGTVRAWDDKGAARSPREAARRGIGYLPDDRKREGLGLQQSLRDNAALTLRA 370

Query: 361 KPEYRRGPFLDRG---KINDLAQRKLEEFRIVAASTDLPVERLSGGNAQRVILAREFLNA 417
                 GP    G   +   L    L +  + AA  D+PV  LSGGN Q+V++AR     
Sbjct: 371 ----LAGPLAGAGSAARSRSLIDALLNKVEVRAADFDMPVGALSGGNQQKVMVARWMARE 426

Query: 418 KCLLLANQPTRGLDVAASEFVYEKILEKRAEGFAVFLASEELDDLLRLCDRIAVIFKGKI 477
             L +  +PTRG+DV A   +Y  +      G AV + S ++ +++ LCDRI V+  G+I
Sbjct: 427 PRLWVICEPTRGIDVGAKATIYRLLRAYADAGGAVLVVSSDVAEIIGLCDRICVMALGRI 486

Query: 478 V 478
           V
Sbjct: 487 V 487



 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 12/230 (5%)

Query: 270 VLCDINFTIAENEILGLAGVAGNGQKELFEVLMGVRTLSSGRFHLNGEAIVAPTSREMLD 329
           VL D++      ++  + G  G G+  L +VL G+     G   + G  +          
Sbjct: 32  VLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGEIRIGGRPVRFGHPSAARQ 91

Query: 330 RGVGLVPDDRFREGLISEFGTAENLVLGWQRKPEYRRGPFLDRGKINDLAQRKLEEFRIV 389
            G+ ++  +     L+     A+N+ LG     E  R   +DR  +N  A+  L   R V
Sbjct: 92  AGIAIIHQEL---ALLPHRTVAQNIFLGH----EPSRWGVIDRKAMNAGAEAAL---RRV 141

Query: 390 AASTDLPVE--RLSGGNAQRVILAREFLNAKCLLLANQPTRGLDVAASEFVYEKILEKRA 447
               D   E  RLS    Q V +A+       +L+ ++PT  LD   S  +++ I E R 
Sbjct: 142 GCRIDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVESRKLFDLIAELRR 201

Query: 448 EGFAVFLASEELDDLLRLCDRIAVIFKGKIVGTVRPEETTLLELGMMMAG 497
            G A+   S  + +++ L D I+VI  G+++ T+   E T+  +  +M G
Sbjct: 202 AGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRLMVG 251