Pairwise Alignments

Query, 516 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 504 a.a., Nucleoside ABC transporter, ATP-binding protein from Variovorax sp. SCN45

 Score =  283 bits (725), Expect = 8e-81
 Identities = 184/499 (36%), Positives = 266/499 (53%), Gaps = 15/499 (3%)

Query: 5   LSVQNLTKRFGAVTANDSVDLDVRKGEIHCLFGENGAGKSTLSACLYGYYRADSGVIRFK 64
           L + ++TKR+ AV AN  + L V+ GEIH + GENGAGKSTL   +YG  + D G + F 
Sbjct: 6   LQLAHITKRYPAVVANSDISLAVQPGEIHAVLGENGAGKSTLMKIIYGSVKPDEGTVTFD 65

Query: 65  GQVAELNSPADALRLGIGMVHQHFVLVENFTVLENIIVGSPDVGMLLSKSTARQKVEDLC 124
           GQ   L +P  A  LGI MV QHF L +  TV EN+ +G   +   L  +   + +    
Sbjct: 66  GQAVNLRNPQQARALGISMVFQHFSLFDTLTVAENVWLG---LDKSLQLAEVARSITAKA 122

Query: 125 LRCGIELDLDREIWQLSVGEQQWVEILKALYFGAELLILDEPTAVLTPQQSDQLFVILDG 184
              G+++D  R +  LSVGE Q VEI++AL    +LLILDEPT+VLTPQ   +LF +L  
Sbjct: 123 SEYGLDIDPSRPVHTLSVGEMQRVEIIRALLTNPKLLILDEPTSVLTPQAVLKLFQVLKK 182

Query: 185 MRRQGLSIILISHKLREVMQ-SDRVTILRKGKVVATVETATTTAESITALMVGHQVTKRV 243
           +  +G SI+ ISHKL E+ +     T+LR GKV         + ES++ LM+G +    +
Sbjct: 183 LSSEGCSILYISHKLHEIRELCTGCTVLRGGKVTGVCNPQNESNESLSRLMIGSE-PPPL 241

Query: 244 SDRSVAPGREVLVVDHAVAIGE--WGEEVLCDINFTIAENEILGLAGVAGNGQKELFEVL 301
             R V  G   L V+      E  +G + L  I+F +   E++G+AGV+GNGQKEL   L
Sbjct: 242 KHRPVHAGAVALRVERLSLAREDQFGVD-LDGISFEVRAGEVVGVAGVSGNGQKELLYTL 300

Query: 302 MGVRTLSSG---RFHLNGEAIVAPTSREMLDRGVGLVPDDRFREGLISEFGTAENLVLGW 358
            G    +     R        + P +R  L  G+  VP++R   G +   G A NL+L  
Sbjct: 301 SGEDVRADAAMVRVFDKPAGRLRPRARRAL--GLHFVPEERLGRGAVPTLGLAHNLLL-- 356

Query: 359 QRKPEYRRGPFLDRGKINDLAQRKLEEFRIVAASTDLPVERLSGGNAQRVILAREFLNAK 418
            R     RG ++  G +   A+  +E F + A         LSGGN Q+ I+ RE     
Sbjct: 357 TRGNAVGRGGWIRTGVLERHARSIIERFNVKAGGPHAAARSLSGGNLQKFIVGREIDANP 416

Query: 419 CLLLANQPTRGLDVAASEFVYEKILEKRAEGFAVFLASEELDDLLRLCDRIAVIFKGKIV 478
            L + +QPT G+DV A+  +  +IL  R  G AV + SEELD+L  + DR+ VI KG++ 
Sbjct: 417 RLFIVSQPTWGVDVGAAALIRGEILALRDAGCAVLVVSEELDELFEISDRLHVIAKGRLS 476

Query: 479 GTVRPEETTLLELGMMMAG 497
            ++     T  ++G  M+G
Sbjct: 477 PSIDRAAATPAQIGEWMSG 495



 Score = 64.7 bits (156), Expect = 8e-15
 Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 14/227 (6%)

Query: 273 DINFTIAENEILGLAGVAGNGQKELFEVLMGVRTLSSGRFHLNGEAIVAPTSREMLDRGV 332
           DI+  +   EI  + G  G G+  L +++ G      G    +G+A+     ++    G+
Sbjct: 23  DISLAVQPGEIHAVLGENGAGKSTLMKIIYGSVKPDEGTVTFDGQAVNLRNPQQARALGI 82

Query: 333 GLVPDDRFRE-GLISEFGTAENLVLGWQRKPEYRRGPFLDRGKINDLAQRKLEEFRIVAA 391
            +V    F+   L      AEN+ LG  +         L   ++      K  E+ +   
Sbjct: 83  SMV----FQHFSLFDTLTVAENVWLGLDKS--------LQLAEVARSITAKASEYGL-DI 129

Query: 392 STDLPVERLSGGNAQRVILAREFLNAKCLLLANQPTRGLDVAASEFVYEKILEKRAEGFA 451
               PV  LS G  QRV + R  L    LL+ ++PT  L   A   +++ + +  +EG +
Sbjct: 130 DPSRPVHTLSVGEMQRVEIIRALLTNPKLLILDEPTSVLTPQAVLKLFQVLKKLSSEGCS 189

Query: 452 VFLASEELDDLLRLCDRIAVIFKGKIVGTVRPEETTLLELGMMMAGN 498
           +   S +L ++  LC    V+  GK+ G   P+  +   L  +M G+
Sbjct: 190 ILYISHKLHEIRELCTGCTVLRGGKVTGVCNPQNESNESLSRLMIGS 236