Pairwise Alignments

Query, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 373 a.a., ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) from Variovorax sp. SCN45

 Score =  134 bits (336), Expect = 5e-36
 Identities = 105/331 (31%), Positives = 156/331 (47%), Gaps = 20/331 (6%)

Query: 14  WNFACYAAAMLCALVSAAALLHLSGGDVAKAFSSLIVGAFGSQKALLGSLAKATPLLLVG 73
           W     AAA+L     +AA+L ++G    +  +  +   F   +     L +A P++LVG
Sbjct: 35  WQALILAAALLVGFAISAAILVMAGVPADELANEFVTQTFLDGQNFRAVLFQAAPMILVG 94

Query: 74  LGTVIAFRAKIWNIGQEGQVLAGAMCAYWASLW-IGP----LPYWIAFTVLVLAGLAGGG 128
           L   IAFRA+ WN+G EGQ++ GA+ A   S+W IGP    LP       L+     G G
Sbjct: 95  LAGAIAFRARFWNLGLEGQMIWGAIGATAVSMWQIGPENLRLP-------LMFVAAVGCG 147

Query: 129 ALGVLAGV-LKTRFGTSEIISTVMLNYIVIFLLAYLLDGGPWMETGVTVAYHQSPPVNAM 187
            L VL    LK + G +EIIST+MLNY+    L +L+ G  W +      Y  SP   A 
Sbjct: 148 LLWVLGPAWLKLKLGVNEIISTLMLNYMAANFLLHLVYGS-WKDPKDNFPY--SPQFRAF 204

Query: 188 LEWPTLLGQGAHKLHFGFLLALVATVLCAVLLERTPLGYEIRAFGSNPTALRFRGTDISR 247
              P  +G G        LLA V  +L   L+  +  G  +R   +NP      G  + R
Sbjct: 205 ERLPE-IGAGVGS---SILLAGVVALLAWWLVSVSRAGLYLRFVDANPRVAHANGVPVRR 260

Query: 248 LLLVVMLVSGALAGLAGAGELFGTSHRLRAETLLGIGSSGIVVAMVGGLRPSGAMLAALF 307
            +   +L+SGA+AGLAG     G   RL      G G SGI++A +    P  A + AL 
Sbjct: 261 TIYGAVLLSGAMAGLAGFAVAAGQEGRLTQAFYQGYGFSGILIAFLARNNPLAATVVALL 320

Query: 308 FGALKSGAIYMRLQSGTPAGLVSAMEGLVLL 338
             AL      +++    P  +V  ++ ++++
Sbjct: 321 VAALFVTGRSLQVFYQVPFSMVQLIQAIIVV 351