Pairwise Alignments

Query, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 355 a.a., Nucleoside ABC transporter, permease protein 1 from Variovorax sp. SCN45

 Score =  183 bits (465), Expect = 5e-51
 Identities = 112/358 (31%), Positives = 196/358 (54%), Gaps = 8/358 (2%)

Query: 1   MISVQRRSGNSLSWNFACYAAAMLCALVSAAALLHLSGGDVAKAFSSLIVGAFGSQKALL 60
           M+ +++R   S +        A++  ++ +A L+  +G  V + ++ L+ G FGS  A  
Sbjct: 1   MMRLEKRHQTSRAALVLAPIGAVVFTMIVSALLVLWAGAPVGRTYALLLQGGFGSVFAWS 60

Query: 61  GSLAKATPLLLVGLGTVIAFRAKIWNIGQEGQVLAGAMCAYWASLWIG----PLPYWIAF 116
            +L +A PL+L GL   +AF+A+++NIG EGQ+ AGA+ A       G     L  W+ F
Sbjct: 61  ETLTRAIPLILTGLAATVAFKARLFNIGSEGQLYAGALAAVAVGGMHGGTGFELSPWLLF 120

Query: 117 TVLVLAGLAGGGALGVLAGVLKTRFGTSEIISTVMLNYIVIFLLAYLLDGGPWMETGVTV 176
            +++LA    G  + +   ++K + G  E+++T+++N+IV+  ++ LLDG   M+    +
Sbjct: 121 PLMMLAAAVAGALMLLGPALMKNKLGVDEVVTTLLINFIVLLGVSALLDGP--MKDPTAM 178

Query: 177 AYHQSPPVNAMLEWPTLLGQGAHKLHFGFLLALVATVLCAVLLERTPLGYEIRAFGSNPT 236
            + QS  + + LE   L+ Q   ++H G L A+   V+   + + T LG++IRA G+N  
Sbjct: 179 GWPQSVSLQSDLELGKLVAQT--RVHTGLLWAVSLAVMVWAVFKYTVLGFDIRAVGANAR 236

Query: 237 ALRFRGTDISRLLLVVMLVSGALAGLAGAGELFGTSHRLRAETLLGIGSSGIVVAMVGGL 296
           A  F G  ++R +++V L+SGALAGLAGA E+ G +  +  +   G G +GIV+AM+ GL
Sbjct: 237 AAAFAGVPVTRTVVMVALLSGALAGLAGAIEVAGRTSYVTLDMSPGYGYTGIVIAMLAGL 296

Query: 297 RPSGAMLAALFFGALKSGAIYMRLQSGTPAGLVSAMEGLVLLFFLCAAVATRIHITVR 354
            P G + A +F   +  GA  M    G P  +   +    L+  L A + T+  + ++
Sbjct: 297 HPLGVIAAGVFVAGVLVGADTMSRAVGVPTYIADVIVAASLIAVLVATLLTQYRVRMK 354