Pairwise Alignments

Query, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 318 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 56.2 bits (134), Expect = 1e-12
 Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 28/211 (13%)

Query: 120 VLAGLAGGGALGVLAGVLKTRFGTSEIISTVMLNYIVIFLLAYLLDGGPWMETGVTVAYH 179
           V+ G+  G  LG   G   TRF     ++T+ +  I                 G+T+ + 
Sbjct: 99  VILGVGLGFGLGWFNGWTITRFKVPPFVATLAMLTIA---------------RGLTMLWT 143

Query: 180 QSPPVNAMLEWPTLLGQGAHK-LHFGFLLALVATVLCAVLLERTPLGYEIRAFGSNPTAL 238
              P+N + E    LG G    +     +  V   L  +L ++T  G  + A G N  A 
Sbjct: 144 GGFPINGLGEDFAFLGTGWFLGIPMPVWITAVIVALAVLLTKKTKFGRYVYAIGGNERAA 203

Query: 239 RFRGTDISRLLLVVMLVSGALAGLAGAGELFGTSHRLRAETLLGIG--SSGIVVAMVGGL 296
           R  G +ISR+ + V  ++G   GLA  G +  TS    A+   GI      I   ++GG 
Sbjct: 204 RLSGINISRVKMTVYAIAG---GLAAVGGMIVTSRLDSAQPNAGISYELDAIAAVVIGGT 260

Query: 297 RPS-------GAMLAALFFGALKSGAIYMRL 320
             S       GA+L  +  G L +G + + +
Sbjct: 261 SLSGGKGTIMGAVLGGIIIGVLNNGLVLLNV 291