Pairwise Alignments

Query, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 367 a.a., ABC transporter, membrane spanning protein (sugar/ribonucleotide) from Agrobacterium fabrum C58

 Score =  149 bits (375), Expect = 2e-40
 Identities = 105/337 (31%), Positives = 165/337 (48%), Gaps = 13/337 (3%)

Query: 15  NFACYAAAMLCALVSAAALLHLS----GGDVAKAFSSLIVGAFGSQKALLGSLAKATPLL 70
           N+  Y    L  +V+A  +  L     G +   A   LI GA G   A+  +L   T  +
Sbjct: 10  NWISYGLLPLLNVVTAFLISGLVVWSIGENPLAALRLLIEGALGRGDAIGFTLFYTTSFI 69

Query: 71  LVGLGTVIAFRAKIWNIGQEGQVLAGAMCAYWASLWIGP-LPYWIAFTVLVLAGLAGGGA 129
             GL   +AF A ++NIG EGQ   G + A   +L +   +P+++     V+     G A
Sbjct: 70  FTGLSVAVAFHAGLFNIGSEGQAYVGGLGAALVALALDRYVPWYVTMPFAVIGAAVFGAA 129

Query: 130 LGVLAGVLKTRFGTSEIISTVMLNYIVIFLLAYLL------DGGPWMETGVTVAYHQSPP 183
              +   L+ + G+  +I+T+M N+I   L+ YLL       G    ET   +   Q P 
Sbjct: 130 WAFIPAWLQAKRGSHVVITTIMFNFIAAALMVYLLVNVLIVPGKMAPETRTFLPGGQLPK 189

Query: 184 VNAMLEWPTLLGQGAHKLHFGFLLALVATVLCAVLLERTPLGYEIRAFGSNPTALRFRGT 243
           ++ ++ W  L   G    +  FL+ALV   L  VL+ RT LGYE+R  G +P+A  + G 
Sbjct: 190 LDWLMAWFGLK-LGPAPFNVSFLIALVMCFLVWVLIWRTKLGYEMRTLGVSPSAAIYAGI 248

Query: 244 DISRLLLVVMLVSGALAGLAGAGELFGTSHRLRAETLLGIGSSGIVVAMVGGLRPSGAML 303
             SR +++ ML+SG LAG+     + G S RL+ E + G G  GI V+++G   P G + 
Sbjct: 249 PYSRTVIIAMLISGGLAGMMALNPVMGASARLQVEFVGGAGFVGIAVSLMGRSHPLGIIF 308

Query: 304 AALFFGALKSGAIYMRLQ-SGTPAGLVSAMEGLVLLF 339
           +AL FG L  G   +  +       ++  ++GLV+LF
Sbjct: 309 SALLFGILYQGGADLSFEMPNITREMIVVIQGLVILF 345