Pairwise Alignments

Query, 310 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 373 a.a., ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) from Variovorax sp. SCN45

 Score = 71.2 bits (173), Expect = 3e-17
 Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 26/251 (10%)

Query: 21  ATPLLFSAMGELVTQRAGIWNISVEGTMLLGAVVAYVIASSTGSP----WLALFVAVLAC 76
           A P++   +   +  RA  WN+ +EG M+ GA+ A  ++     P       +FVA + C
Sbjct: 87  AAPMILVGLAGAIAFRARFWNLGLEGQMIWGAIGATAVSMWQIGPENLRLPLMFVAAVGC 146

Query: 77  ALLSVI-LSFVTIVLKSEQFIAGLALNLLASGLTLFWFQTYIIGRDP-------PKFAGF 128
            LL V+  +++ + L   + I+ L LN +A+   L     Y   +DP       P+F  F
Sbjct: 147 GLLWVLGPAWLKLKLGVNEIISTLMLNYMAANFLLHL--VYGSWKDPKDNFPYSPQFRAF 204

Query: 129 EAVEIQYLSDIPVLGTVLFSQRVLTYVSFLLPLAVWFFLYRTRYGLEVRCVGENPKALDV 188
           E         +P +G  + S  +L  V  LL    W+ +  +R GL +R V  NP+    
Sbjct: 205 ER--------LPEIGAGVGSSILLAGVVALL---AWWLVSVSRAGLYLRFVDANPRVAHA 253

Query: 189 KGLSVGSRRCLAIMFGSVMSGFGGAFLMLGYSDRFVPDLIAGRGWL-VVVAIIAGNWMPF 247
            G+ V      A++    M+G  G  +  G   R       G G+  +++A +A N    
Sbjct: 254 NGVPVRRTIYGAVLLSGAMAGLAGFAVAAGQEGRLTQAFYQGYGFSGILIAFLARNNPLA 313

Query: 248 RVVGAIFIFAL 258
             V A+ + AL
Sbjct: 314 ATVVALLVAAL 324