Pairwise Alignments

Query, 310 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 323 a.a., ABC transporter, membrane spanning protein (sugar/ribonucleotide) from Agrobacterium fabrum C58

 Score =  192 bits (489), Expect = 7e-54
 Identities = 110/317 (34%), Positives = 173/317 (54%), Gaps = 15/317 (4%)

Query: 9   LFISILAAMVRIATPLLFSAMGELVTQRAGIWNISVEGTMLLGAVVAYVIASSTGSPWLA 68
           + +SIL + VR+  PLLF+A+  L ++RAG+++I +EG ML  A  +  +A  T +PW  
Sbjct: 6   MLVSILGSTVRLTIPLLFTALAGLFSERAGVFDIGLEGKMLAAAFASACVAYLTANPWAG 65

Query: 69  LFVAVLACALLSVILSFVTIVLKSEQFIAGLALNLLASGLTLFWFQTYII--GRDPP--- 123
           L   +    L S+I  F  I  +  Q ++G+ALN +A+GLT+   Q +    GR P    
Sbjct: 66  LLAGIGVSILFSLIHGFAVITNRGNQIVSGVALNFIAAGLTVVLGQAWFGQGGRTPQLPG 125

Query: 124 --KFAGFEAVEIQYLSDIPVLG----TVLFSQRVLTYVSFLLPLAVWFFLYRTRYGLEVR 177
             +FA         + ++P +G     V+    +LTY++FL     W+ LYRTR+GL +R
Sbjct: 126 EGRFAPIILPGADAMREVPFIGPLYANVISGNNILTYLAFLAVPLSWWVLYRTRFGLRLR 185

Query: 178 CVGENPKALDVKGLSVGSRRCLAIMFGSVMSGFGGAFLMLGYSDRFVPDLIAGRGWLVVV 237
            VGENP A+D  G+SV   R  A++    + GF GA+L +  S  F+ ++ AG+G++ + 
Sbjct: 186 AVGENPGAVDTAGISVTWMRYRAVIVAGFLCGFSGAYLAVAQSAAFIANMSAGKGYIALA 245

Query: 238 AIIAGNWMPFRVVGAIFIFALLEAVGIHAQ---VVGV-SVPHHVFLVLPYVASLVLLAGL 293
           A+I   W P  V+ A  +F  L+A     Q   V G+  VP  +F  +PY+ + +LLAG 
Sbjct: 246 ALIFAKWKPVPVMFACLLFGFLDAFANFMQGKSVPGIGEVPVQIFQAMPYILTCILLAGF 305

Query: 294 RSRTHQPAALGIPYRRE 310
                 P A G+ Y +E
Sbjct: 306 IGVAKPPKAGGVAYAKE 322