Pairwise Alignments

Query, 295 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 375 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas simiae WCS417

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 20/264 (7%)

Query: 7   AQVEPRVGSPSHGSLPETIARRVGDQWRITGHKTYATGIPLLRWVAVLAVTDEPEPRLG- 65
           A  EP+ GS +  S  +T AR  GD + + G K + T       V V AVTD    + G 
Sbjct: 122 ALTEPQAGSDA--SSLKTRARLEGDHYVLNGCKQFITSGQNAGVVIVFAVTDPAAGKRGI 179

Query: 66  -SFLVPTSADGIRVEKTWNATGMRATNSDDLILDDVAIPLEDVLEIAPASEGLK------ 118
            +F+VPT + G  V +  +  G  A+++  ++ +DV +P+ +   +    EG K      
Sbjct: 180 SAFIVPTDSPGYSVARVEDKLGQHASDTCQILFEDVKVPVAN--RLGEEGEGYKIALANL 237

Query: 119 RDERMGAWYFSLVPAIYDGAARGARDWLIDFTTSRAPASLGAPLSTVPRIQDGLGEIEVL 178
              R+G      + +   G AR A +   D+   R   S G P+     +   L ++   
Sbjct: 238 EGGRVG------IASQAVGMARAAFEAARDYARERE--SFGKPIIEHQAVAFRLADMATQ 289

Query: 179 LTVNRRLLRSIAEDFDSGRAFGADAAAVKHTVIANAITVTTLALELGGNPGISRDNPLER 238
           + V R+++   A   DSG+    +A+  K      A  V + AL+  G  G   D PLER
Sbjct: 290 IAVARQMVHYAAALRDSGKPALVEASMAKLFASEMAEKVCSAALQTLGGYGYLSDFPLER 349

Query: 239 HHRDALSGKAHAPQNNLIRMMLAK 262
            +RD    + +   +++ RM++++
Sbjct: 350 IYRDVRVCQIYEGTSDIQRMVISR 373