Pairwise Alignments

Query, 295 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 376 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 20/262 (7%)

Query: 10  EPRVGSPSHGSLPETIARRVGDQWRITGHKTYATGIPLLRWVAVLAVTDEPEPRLG--SF 67
           EP+ GS +  S   T AR+ GD + I G K + T     +   V+AVTD+   + G  +F
Sbjct: 125 EPQAGSDA--SSLRTTARKDGDAYVIDGVKQFITSGKNGQVAIVIAVTDKGAGKRGMSAF 182

Query: 68  LVPTSADGIRVEKTWNATGMRATNSDDLILDDVAIPLEDVLEIAPASEGLK------RDE 121
           LVPT A G  V +  +  G  ++++  +  D   IP+E++  I    EG K         
Sbjct: 183 LVPTDAPGYNVARLEDKLGQHSSDTAQINFDGCRIPVENL--IGAEGEGYKIALGALEGG 240

Query: 122 RMGAWYFSLVPAIYDGAARGARDWLIDFTTSRAPASLGAPLSTVPRIQDGLGEIEVLLTV 181
           R+G      + A   G AR A D  + +   R   + G  +     +   L E    L  
Sbjct: 241 RIG------IAAQSVGMARSAFDVALAYAKERQ--AFGGSIFDQQAVGFRLAECATQLEA 292

Query: 182 NRRLLRSIAEDFDSGRAFGADAAAVKHTVIANAITVTTLALELGGNPGISRDNPLERHHR 241
            R+L+   A   D+GR    +AA  K      A  V + A++  G  G   D PLER +R
Sbjct: 293 ARQLIWHAAALRDAGRPCLKEAAMAKLFASEMAERVCSAAIQTLGGYGYVNDFPLERIYR 352

Query: 242 DALSGKAHAPQNNLIRMMLAKA 263
           D    + +   +++ ++++ +A
Sbjct: 353 DVRVCQIYEGTSDIQKLLIQRA 374