Pairwise Alignments

Query, 295 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 20/264 (7%)

Query: 7   AQVEPRVGSPSHGSLPETIARRVGDQWRITGHKTYATGIPLLRWVAVLAVTDEPEPRLG- 65
           A  EP+ GS +  S  +T AR  GD + + G K + T       V V AVTD    + G 
Sbjct: 122 ALTEPQAGSDA--SSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGI 179

Query: 66  -SFLVPTSADGIRVEKTWNATGMRATNSDDLILDDVAIPLEDVLEIAPASEGLK------ 118
            +F+VPT + G +V +  +  G  A+++  ++ D+V +P+ +   +    EG K      
Sbjct: 180 SAFIVPTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVAN--RLGAEGEGYKIALANL 237

Query: 119 RDERMGAWYFSLVPAIYDGAARGARDWLIDFTTSRAPASLGAPLSTVPRIQDGLGEIEVL 178
              R+G      + +   G AR A +   D+   R   S G PL     +   L ++   
Sbjct: 238 EGGRIG------IASQAVGMARAAFEVARDYANERQ--SFGKPLIEHQAVAFRLADMATK 289

Query: 179 LTVNRRLLRSIAEDFDSGRAFGADAAAVKHTVIANAITVTTLALELGGNPGISRDNPLER 238
           ++V R+++   A   D+GR    +A+  K      A  V + AL+  G  G   D PLER
Sbjct: 290 ISVARQMVLHAAALRDAGRPALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLER 349

Query: 239 HHRDALSGKAHAPQNNLIRMMLAK 262
            +RD    + +   +++ RM++A+
Sbjct: 350 IYRDVRVCQIYEGTSDIQRMVIAR 373