Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 336 a.a., dipeptide ABC transporter, permease component (from data) from Pseudomonas simiae WCS417

 Score =  219 bits (559), Expect = 6e-62
 Identities = 129/329 (39%), Positives = 185/329 (56%), Gaps = 15/329 (4%)

Query: 11  LRRTLLQAVPTILGIVILNFFLLQLAPGDAADVLAGEAGSATEESVAALRARFGLDSPVL 70
           + R L   +PT  GI +L F L+++ PGD  +V+ GE     E    A+  R GL+ P+ 
Sbjct: 5   IARRLGLLIPTFFGITLLTFALIRMIPGDPVEVMMGERRVDPEMHAQAME-RLGLNKPLY 63

Query: 71  EQLATYLGNLAQFSLGFSPRYGMPVADLIAQRLPGTLTLMAVALFIAILLGVVLGSLMAS 130
            Q   Y+G LAQ  LG S R    V        P TL L   AL  A +LG++ G + A 
Sbjct: 64  AQYLDYVGKLAQGDLGESLRTRTSVWTEFTALFPATLELSMAALLFAGILGLLAGVIAAL 123

Query: 131 FAGRIPDRLLSIFSLLFYSIPSFWIGLMLIVLFSVKLGWLPSGGAATIGSQLK---GF-- 185
             G + D  +   SL  YS+P FW GL+LI+ FSV LGW P  G   +   ++   GF  
Sbjct: 124 KRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPRTGFML 183

Query: 186 ---------PALLDKARYMVLPATSLALFYVAIYARLTRAAMLEVKNHDFVRTAYAKGLT 236
                     A  D   +++LPA  L    +A+ AR+TR++MLEV   D++RTA AKGL+
Sbjct: 184 IDTLLADEPDAFWDALHHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTAKAKGLS 243

Query: 237 PFGVTARHILRNALIPITTMAGMHIGGMLGGAVVVETVYSWPGLGRLAFEAVMGRDFTVL 296
           P  V   H LRNALIP+ T+ G+ +G +L GAV+ ET++SWPG+G+   EA+  RD+ V+
Sbjct: 244 PARVVFVHGLRNALIPVLTVVGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDYPVV 303

Query: 297 LGILLLSSLLVIIANAAVDLVHAWLDPRI 325
              +LL + LVI+ N  VD+++ + +PRI
Sbjct: 304 QNGILLIACLVILVNFVVDILYGFANPRI 332