Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 334 a.a., Dipeptide ABC transporter, permease protein DppB (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  216 bits (550), Expect = 6e-61
 Identities = 126/322 (39%), Positives = 181/322 (56%), Gaps = 17/322 (5%)

Query: 19  VPTILGIVILNFFLLQLAPGDAADVLAGEAGSATEESVAALRARFGLDSPVLEQLATYLG 78
           VPT +G+ +L FFL++L PGD  + +AGE G       A LR  +G D PV+ Q   Y+G
Sbjct: 13  VPTFIGMTLLAFFLIRLVPGDPIETMAGERGIDPARH-AELRTAYGFDKPVIVQYGIYIG 71

Query: 79  NLAQFSLGFSPRYGMPVADLIAQRLPGTLTLMAVALFIAILLGVVLGSLMASFAGRIPDR 138
            +    LG S      V        P T+ L   A+  A+LLG+  G L A     I D 
Sbjct: 72  RVLHGDLGKSIITQDTVMSEFLALFPATVELAVCAILFALLLGLPAGILAAVRRNSIFDH 131

Query: 139 LLSIFSLLFYSIPSFWIGLMLIVLFSVKLGWLPSGGAATIGSQLK---GFPALLDKAR-- 193
            +   SL  YS+P FW GL+LI+ FSV+LGW P  G   +   ++   GF  L+D  R  
Sbjct: 132 GVMATSLTGYSMPIFWWGLLLILFFSVQLGWTPVSGRIAVQYYIEPETGF-LLIDSLRAG 190

Query: 194 ----------YMVLPATSLALFYVAIYARLTRAAMLEVKNHDFVRTAYAKGLTPFGVTAR 243
                     +++LPA  L    +A+ AR+TR+AMLEV   D++RTA AKGL+   V   
Sbjct: 191 DTGAFWSALHHLILPAVVLGTVPLAVIARMTRSAMLEVLGEDYIRTARAKGLSRLRVVGL 250

Query: 244 HILRNALIPITTMAGMHIGGMLGGAVVVETVYSWPGLGRLAFEAVMGRDFTVLLGILLLS 303
           H LRNALIP+ T+ G+ +G +  GA++ ET++SWPG+G+   EA+  RD+ VL G +LL 
Sbjct: 251 HALRNALIPVVTVIGLQVGVLFTGAILTETIFSWPGVGKWLIEAIGRRDYPVLQGGMLLL 310

Query: 304 SLLVIIANAAVDLVHAWLDPRI 325
             +V++ N  VD+ +  ++PRI
Sbjct: 311 GGIVMLVNLLVDVAYGVINPRI 332