Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 317 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  211 bits (537), Expect = 2e-59
 Identities = 117/301 (38%), Positives = 178/301 (59%), Gaps = 8/301 (2%)

Query: 25  IVILNFFLLQLAPGDAADVLAGEAGSATEESVAALRARFGLDSPVLEQLATYLGNLAQFS 84
           + +L F L + A GD   VL G+   AT   +A ++  +GLD P+  Q   +L  + Q +
Sbjct: 23  VAVLVFVLTRAASGDPVSVLLGD--QATAADIARVQKEYGLDKPLPVQFGYWLREVLQGN 80

Query: 85  LGFSPRYGMPVADLIAQRLPGTLTLMAVALFIAILLGVVLGSLMASFAGRIPDRLLSIFS 144
           LG S     PV   + +R   T  L  +A+ IA L+GV  G + A F GR+ D+L +  +
Sbjct: 81  LGTSIFLQRPVTQALWERSEPTTLLALMAVAIAALIGVPCGIVSAVFRGRVVDQLFTGIA 140

Query: 145 LLFYSIPSFWIGLMLIVLFSVKLGWLPSGGAATIGSQLKGFPALLDKARYMVLPATSLAL 204
           +L  SIPSFW+G++LI +F+V  GW P  G     +         ++   +VLPAT L L
Sbjct: 141 MLGASIPSFWLGIVLIQIFAVSFGWFPVSGYGAPDAPFA------ERLHSLVLPATVLGL 194

Query: 205 FYVAIYARLTRAAMLEVKNHDFVRTAYAKGLTPFGVTARHILRNALIPITTMAGMHIGGM 264
              A+  R TRA+ML+V   D+VRTA +KGL+   V  +H LRNAL+PI T+ G+ +  M
Sbjct: 195 LNSALIIRFTRASMLDVLGEDYVRTARSKGLSESVVVLKHALRNALVPIVTVIGLTVALM 254

Query: 265 LGGAVVVETVYSWPGLGRLAFEAVMGRDFTVLLGILLLSSLLVIIANAAVDLVHAWLDPR 324
           +GGAV+ ETV+  PG+G L   AV+ RD+ V+ G LL+ + + ++ N ++DL++A +DPR
Sbjct: 255 IGGAVITETVFGLPGVGNLVVSAVLRRDYPVIQGALLVIAAIYVLINFSIDLLYAVVDPR 314

Query: 325 I 325
           +
Sbjct: 315 V 315