Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 313 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  218 bits (555), Expect = 2e-61
 Identities = 122/315 (38%), Positives = 184/315 (58%), Gaps = 8/315 (2%)

Query: 11  LRRTLLQAVPTILGIVILNFFLLQLAPGDAADVLAGEAGSATEESVAALRARFGLDSPVL 70
           L + LL  +P +L + +  F +++L PGD A V+ G   SAT E +  +R + GL  P+ 
Sbjct: 5   LGKRLLATLPVLLVVAVAIFMIVRLTPGDPAAVIGGN--SATNEDLDRIRVQLGLTRPLW 62

Query: 71  EQLATYLGNLAQFSLGFSPRYGMPVADLIAQRLPGTLTLMAVALFIAILLGVVLGSLMAS 130
           EQ A +   +    LGFS     PV +LI QR+  TL+L    L +A+ + + LG+L A 
Sbjct: 63  EQFAIWCNGVLHGDLGFSFFLNKPVTELIGQRMEPTLSLAGGTLLLAVAIALPLGTLAAW 122

Query: 131 FAGRIPDRLLSIFSLLFYSIPSFWIGLMLIVLFSVKLGWLPSGGAATIGSQLKGFPALLD 190
             G   D+ +  FS+  +S+P F +G +LI L ++KL W P  G   I   +  +     
Sbjct: 123 RMGGWLDKAVMAFSVAGFSVPVFVVGYVLIYLLAMKLQWFPVQGYRRIADGVGPW----- 177

Query: 191 KARYMVLPATSLALFYVAIYARLTRAAMLEVKNHDFVRTAYAKGLTPFGVTARHILRNAL 250
               +VLP  +LA+ YVA+ +R+TRAA+ E    DF+RTA AKG+T   V   H LRNA 
Sbjct: 178 -LHQLVLPCLTLAITYVALLSRVTRAAVSEALTEDFIRTARAKGITELEVLKHHALRNAA 236

Query: 251 IPITTMAGMHIGGMLGGAVVVETVYSWPGLGRLAFEAVMGRDFTVLLGILLLSSLLVIIA 310
           +P+ T+ G+    +LGG VV ETV++ PGLG+L  +AV+ RDF VL G++L  +++ +  
Sbjct: 237 VPVVTVIGVSAALLLGGVVVTETVFAIPGLGQLTVDAVLNRDFPVLQGVVLFFAVVYVAV 296

Query: 311 NAAVDLVHAWLDPRI 325
           N  VDL + ++DPRI
Sbjct: 297 NLLVDLSYLFIDPRI 311