Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 316 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  219 bits (558), Expect = 7e-62
 Identities = 128/317 (40%), Positives = 194/317 (61%), Gaps = 9/317 (2%)

Query: 11  LRRTLLQAVPTILGIVILNFFLLQLAPGDAADVLAGEAGSATEESVAALRARFGLDSPVL 70
           L+RTL   + T++G  I+ F +L++ PG+AA +L G    A+ E+VAAL  + GLD P  
Sbjct: 6   LKRTLT-LIGTLVGASIIVFLVLEILPGNAAQMLMGP--DASPEAVAALATKLGLDLPAW 62

Query: 71  EQLATYLGNLAQFSLGFSPRYGMPVADLIAQRLPGTLTLMAVALFIAILLGVVLGSLMAS 130
            +   ++G L   +LG S  Y  PV DLI +RL  T+ L  +A+F   ++ +++G   A+
Sbjct: 63  TRYWHWIGGLLTGNLGDSYAYSSPVLDLILERLALTMPLALLAMFFTTVIALLVGVTAAA 122

Query: 131 FAGRIPDRLLSIFSLLFYSIPSFWIGLMLIVLFSVKLGWLPSGGAATIGSQLKGFPALLD 190
              ++ D  L   + +  +IP+FW  ++LI++FSVKL W  +GG    G    GF     
Sbjct: 123 RHNKLGDVGLMGMAQVGIAIPNFWFAILLILVFSVKLQWFSAGGFEGWGD---GF---FS 176

Query: 191 KARYMVLPATSLALFYVAIYARLTRAAMLEVKNHDFVRTAYAKGLTPFGVTARHILRNAL 250
             + ++LPA SLA+   AI AR+TR+A+LEV   DFVRTA AKG++   V   H+LRNA+
Sbjct: 177 GVKSLLLPALSLAVVQAAILARITRSAVLEVMREDFVRTARAKGVSQRMVLWTHVLRNAM 236

Query: 251 IPITTMAGMHIGGMLGGAVVVETVYSWPGLGRLAFEAVMGRDFTVLLGILLLSSLLVIIA 310
           IP+ T+ GM    +L G +VVE V+  PGLGRL F+A+  RD  V+   ++L + +V+I 
Sbjct: 237 IPVITVMGMQFSELLAGTIVVENVFYLPGLGRLIFQAISNRDLIVVRNCVMLLAAMVVIV 296

Query: 311 NAAVDLVHAWLDPRIGA 327
           N  VD+++A +DPRI A
Sbjct: 297 NFVVDVLYAVIDPRIKA 313