Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 326 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  204 bits (519), Expect = 2e-57
 Identities = 120/322 (37%), Positives = 182/322 (56%), Gaps = 8/322 (2%)

Query: 7   IARTLRRTLLQAVPTILGIVILNFFLLQLAPGDAADVLAGEAGSATEESVAALRARFGLD 66
           IA  LRR L+QAV  ++ +  + F L Q   GD    L G+   A  + +  LRA  GLD
Sbjct: 2   IAFVLRR-LIQAVIVMIAVAFIAFLLFQYV-GDPVVFLLGQ--DAKPDQIRELRAALGLD 57

Query: 67  SPVLEQLATYLGNLAQFSLGFSPRYGMPVADLIAQRLPGTLTLMAVALFIAILLGVVLGS 126
            P   Q   +L N AQ   G S R G  V+ LI +R P TL L  VA  +A+ +G+ +G 
Sbjct: 58  QPFFVQFWHFLVNAAQGEFGLSLRQGAKVSRLIGERFPATLELALVAAVLALFIGIPMGV 117

Query: 127 LMASFAGRIPDRLLSIFSLLFYSIPSFWIGLMLIVLFSVKLGWLPS---GGAATIGSQLK 183
             A   G    +     SLL  S+P+F IG++LI++F+V LGW PS   G     G    
Sbjct: 118 YTALRRGTFMSQFFMTVSLLGVSLPTFLIGILLILVFAVTLGWFPSFGRGETVKFGWWTS 177

Query: 184 GFPALLDKARYMVLPATSLALFYVAIYARLTRAAMLEVKNHDFVRTAYAKGLTPFGVTAR 243
           G  ++ D  +++VLPA +LA+F + +  RL RA MLEV   D+++ A A+GL+   +   
Sbjct: 178 GLFSV-DGWQHIVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFG 236

Query: 244 HILRNALIPITTMAGMHIGGMLGGAVVVETVYSWPGLGRLAFEAVMGRDFTVLLGILLLS 303
           H L+N L+P+ T+ G+ +GG++  A++ E+V+ WPG+G L  +AV   D  V+   L L 
Sbjct: 237 HALKNTLVPVMTITGLQLGGLIAFAIITESVFQWPGMGLLFIQAVTFADIPVMAAYLCLI 296

Query: 304 SLLVIIANAAVDLVHAWLDPRI 325
           +L+ ++ N  VDL++  +DPR+
Sbjct: 297 ALIFVVINLVVDLLYFVVDPRL 318