Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 314 a.a., ABC transporter membrane spanning protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  204 bits (520), Expect = 2e-57
 Identities = 119/314 (37%), Positives = 185/314 (58%), Gaps = 9/314 (2%)

Query: 16  LQAVPTILGIVILNFFLLQLAPGDAADVLAGEAGSATEESVAALRARFGLDSPVLEQLAT 75
           +QA+   L + ++ F  L L       +L  EA   T +    L A  GLD P+ EQ   
Sbjct: 1   MQAILVALAMALIVFVGLHLIGSPIETLLPPEA---TYDDRLRLIADLGLDRPLYEQFFL 57

Query: 76  YLGNLAQFSLGFSPRYGMPVADLIAQRLPGTLTLMAVALFIAILLGVVLGSLMASFAGRI 135
           +L  L Q +LG S  Y  P  +LI  RLP TL L   A+ +++++GV LG L A +    
Sbjct: 58  FLKGLLQGNLGVSYVYKEPAVELILSRLPATLELAFAAVLLSLIVGVPLG-LAAGWKPES 116

Query: 136 P-DRLLSIFSLLFYSIPSFWIGLMLIVLFSVKLGWLPSGGAATIGSQLKGFP---ALLDK 191
           P  R++ I S+  +S+P FWI ++LI++FSV+LGWLPS G       L G P     LD 
Sbjct: 117 PLARIIMIGSIFGFSLPIFWIAVLLIMIFSVQLGWLPSSGRGAT-EILFGIPWSFVTLDG 175

Query: 192 ARYMVLPATSLALFYVAIYARLTRAAMLEVKNHDFVRTAYAKGLTPFGVTARHILRNALI 251
            R+M+LPA SL+LF +++  RLT A + E  + ++VR A AKGL+P  + + H+L+N +I
Sbjct: 176 LRHMLLPAISLSLFNISMVTRLTEAGVREAMSSEYVRFARAKGLSPKRILSVHVLKNVMI 235

Query: 252 PITTMAGMHIGGMLGGAVVVETVYSWPGLGRLAFEAVMGRDFTVLLGILLLSSLLVIIAN 311
           P+ T+ G+ IG  +  +VV ET+++WPG+G++  +++   D  V++  L+L  ++ +I N
Sbjct: 236 PVVTVVGLDIGQTIAFSVVTETIFAWPGVGKIIIDSIAALDRPVIVAYLMLVVVMFVIIN 295

Query: 312 AAVDLVHAWLDPRI 325
             VD+ +  LDPRI
Sbjct: 296 LVVDVTYRLLDPRI 309