Pairwise Alignments

Query, 332 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  216 bits (550), Expect = 6e-61
 Identities = 116/272 (42%), Positives = 172/272 (63%), Gaps = 6/272 (2%)

Query: 62  FLANPNALFGTAFLALVIAVALLAPVLYPGDPLSMVGKPFLWP-----GQHPAFPLGTDS 116
           F AN  A+ G   + L++ VA+ AP + P  P       FL P     G   ++ LGTD+
Sbjct: 27  FSANRGAVIGLVTIILLMLVAMFAPWIAPHAPNETNSAVFLQPPAWQQGGSTSYLLGTDA 86

Query: 117 LGRDVLAGILHGSRISLFVGLMATALGLTFGVVVGAIAGYFSGWIDDLLVRLIEIFQTLP 176
           +GRD+L+ +++G+R+SL +G+   AL +  GVV+G IAG+F G ++  ++RL++I  TLP
Sbjct: 87  IGRDILSRLMYGARLSLSIGVAVVALSVVVGVVLGLIAGFFRGVLEIAIMRLMDIVLTLP 146

Query: 177 SFVLLVVLVAIVQPSATTVTLAIAVISWPTVARLTRAEFRAIREKDFVMAARSLGFGHGR 236
           S +L +V+VAI+ P      LA+A++  P   R+TRA   A   +D+V AAR  G G  R
Sbjct: 147 SLLLAIVIVAILGPGLVNAMLAVAIVVLPHYVRITRAAVIAEVSRDYVTAARVSGAGTLR 206

Query: 237 IIVREILPNALPPIIVTSSVMVATAILMESALSFMGLG-DPNVVSWGSMIGTGRELVRTA 295
           ++ RE+LPN   P+IV +S+ ++TAIL  +AL F+GLG  P    WG+M+   RE V  A
Sbjct: 207 LMFREVLPNCAAPLIVQASLGISTAILDAAALGFLGLGAQPPSPEWGTMLADAREFVLRA 266

Query: 296 WYLTALPGLAIVFTVLALNLIGDGLNDALNPR 327
           W++   PGLAI+  VLA NL+GDGL DAL+P+
Sbjct: 267 WWVVTFPGLAILMAVLAFNLLGDGLRDALDPK 298