Pairwise Alignments

Query, 332 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 303 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  274 bits (700), Expect = 2e-78
 Identities = 136/276 (49%), Positives = 187/276 (67%), Gaps = 1/276 (0%)

Query: 55  GRRALKVFLANPNALFGTAFLALVIAVALLAPVLYPGDPLSMVGKPFLWPGQHPAFPLGT 114
           G  AL++FL NP A+ G A L +V+AVA+  P +YP DP  +   P   P    A+ LG+
Sbjct: 28  GMEALRMFLRNPAAIAGMAMLLIVLAVAIAGPWVYPADPFEIKAAPLTPPFSEDAW-LGS 86

Query: 115 DSLGRDVLAGILHGSRISLFVGLMATALGLTFGVVVGAIAGYFSGWIDDLLVRLIEIFQT 174
           D LGRDVL  +++G R +L VG +A  L +  G+ +GA AGY+ G ID  L++L E FQ 
Sbjct: 87  DYLGRDVLTALIYGGRATLLVGAVAALLSVLIGITLGAFAGYYGGKIDAALMKLTEFFQV 146

Query: 175 LPSFVLLVVLVAIVQPSATTVTLAIAVISWPTVARLTRAEFRAIREKDFVMAARSLGFGH 234
           LP+ +  +V+V +  P+  TVTLAI ++SW   ARLTRAEF   R  +FV A R++G G 
Sbjct: 147 LPALLFAMVVVTLFSPTLVTVTLAIGIVSWTGTARLTRAEFMKYRGLEFVRAERAIGAGD 206

Query: 235 GRIIVREILPNALPPIIVTSSVMVATAILMESALSFMGLGDPNVVSWGSMIGTGRELVRT 294
            RII + ILPNALPP++V++++ +  AIL E+ LSF+GLGDPN +SWG MIG+ R+ V +
Sbjct: 207 ARIIWKVILPNALPPLVVSATLAIGAAILFEAGLSFLGLGDPNQMSWGLMIGSSRQYVLS 266

Query: 295 AWYLTALPGLAIVFTVLALNLIGDGLNDALNPRFTQ 330
            W+  A PG AI  TVLA++LIGDGLNDALNP+  +
Sbjct: 267 CWWAVAFPGAAIFITVLAVSLIGDGLNDALNPKLRE 302