Pairwise Alignments

Query, 332 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 274 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  173 bits (439), Expect = 4e-48
 Identities = 101/258 (39%), Positives = 152/258 (58%), Gaps = 4/258 (1%)

Query: 72  TAFLALVIAV-ALLAPVLYPGDPLSMVGKPFLWPGQHPAFPLGTDSLGRDVLAGILHGSR 130
           +A + LVIAV A+ AP+    DP        L         LGTD LGRD+ + I+HG+R
Sbjct: 14  SALVLLVIAVMAIGAPLFASADPNDTAVLERL-KAPSAEHLLGTDELGRDMYSRIVHGAR 72

Query: 131 ISLFVGLMATALGLTFGVVVGAIAGYFSGWIDDLLVRLIEIFQTLPSFVLLVVLVAIVQP 190
            SL +  +     +  G V+G +AG+F   +D  L+R+++   + P  +L + LVAI+ P
Sbjct: 73  YSLAIAALTALGAVVAGTVLGLMAGFFRR-LDAPLMRVVDAMMSFPDILLAIALVAILGP 131

Query: 191 SATTVTLAIAVISWPTVARLTRAEFRAIREKDFVMAARSLGFGHGRIIVREILPNALPPI 250
           S     LA+ ++  P VAR+ RA    +RE  FV A R+LG    RI+ R ILPN + PI
Sbjct: 132 SLVNTVLALVLVYTPRVARVVRASTLVVRELLFVEAVRALGVRTSRILWRHILPNLMSPI 191

Query: 251 IVTSSVMVATAILMESALSFMGLG-DPNVVSWGSMIGTGRELVRTAWYLTALPGLAIVFT 309
           +V  S + A AIL E+ LSF+G+G  P + +WG+M+   ++    A+++   PGLAI+FT
Sbjct: 192 LVQVSFIFAYAILAEAGLSFLGVGVPPEIPTWGTMVAGSQQYAHQAFWVVLFPGLAIIFT 251

Query: 310 VLALNLIGDGLNDALNPR 327
            L+L L+GDG+ D L+P+
Sbjct: 252 ALSLQLLGDGVRDLLDPK 269