Pairwise Alignments

Query, 332 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  197 bits (500), Expect = 3e-55
 Identities = 106/263 (40%), Positives = 163/263 (61%), Gaps = 2/263 (0%)

Query: 71  GTAFLALVIAVALLAPVLYPGDPLSMVGKPFLWPGQHPAFPLGTDSLGRDVLAGILHGSR 130
           G   L +++ VAL AP++ P DPL       L P     F LGTD+ GRDVL+ +++G+R
Sbjct: 28  GIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPPS-AEFWLGTDTYGRDVLSRLIYGTR 86

Query: 131 ISLFVGLMATALGLTFGVVVGAIAGYFSGWIDDLLVRLIEIFQTLPSFVLLVVLVAIVQP 190
           +SL VG +A  + +  G  +G IAGY  G  D L+   +++  + P+ +L +++ A++  
Sbjct: 87  VSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLGLMVAAMLGA 146

Query: 191 SATTVTLAIAVISWPTVARLTRAEFRAIREKDFVMAARSLGFGHGRIIVREILPNALPPI 250
           S   + +AIA+       R+ RA   A++++DFV A RSLG+G GR++   ILPN +  +
Sbjct: 147 SLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVHILPNMISEV 206

Query: 251 IVTSSVMVATAILMESALSFMGLG-DPNVVSWGSMIGTGRELVRTAWYLTALPGLAIVFT 309
           +V  ++ +ATAI  E++LSF+GLG  P   +WGSMI  G E +  AW+LT  P LAI+ T
Sbjct: 207 LVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWWLTVFPSLAILLT 266

Query: 310 VLALNLIGDGLNDALNPRFTQDR 332
           VLAL+L+GD L DA +P+   +R
Sbjct: 267 VLALSLLGDALRDANDPKTRSER 289