Pairwise Alignments

Query, 332 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  171 bits (432), Expect = 3e-47
 Identities = 97/290 (33%), Positives = 160/290 (55%), Gaps = 7/290 (2%)

Query: 44  SQQTAAVAIT-----NGRRALKVFLANPNALFGTAFLALVIAVALLAPVLYPGDPLSMVG 98
           S++T+AV        NG + + +   +P  + G   + L++ + + +P L   DP ++  
Sbjct: 4   SEETSAVRPQKQTRFNGAKLVWMLKGSPLTVTGAVIIVLMLLMMIFSPWLATHDPNAIDL 63

Query: 99  KPFLWPGQHPAFPLGTDSLGRDVLAGILHGSRISLFVGLMATALGLTFGVVVGAIAGYFS 158
              L P    A   GTD +GRD+ + +L GS+ S+  GL+  A+    G ++G ++G   
Sbjct: 64  TARLLPPS-AAHWFGTDEVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLG 122

Query: 159 GWIDDLLVRLIEIFQTLPSFVLLVVLVAIVQPSATTVTLAIAVISWPTVARLTRAEFRAI 218
           G  D +++R+++I  ++PS VL + L A + PS     LAIA++  P   RL R +   +
Sbjct: 123 GRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVV 182

Query: 219 REKDFVMAARSLGFGHGRIIVREILPNALPPIIVTSSVMVATAILMESALSFMGLG-DPN 277
           R+  +V AA++ G     +I   IL N+LPP+IV +S+ + +AILM + L F+GLG    
Sbjct: 183 RQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQP 242

Query: 278 VVSWGSMIGTGRELVRTAWYLTALPGLAIVFTVLALNLIGDGLNDALNPR 327
              WG+M+  GR  V   W+  A PG AI+ T +  NL GDG+ D L+P+
Sbjct: 243 SAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPK 292