Pairwise Alignments

Query, 332 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 299 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  187 bits (474), Expect = 4e-52
 Identities = 105/289 (36%), Positives = 165/289 (57%), Gaps = 3/289 (1%)

Query: 40  PDARSQQTAAVAITNGRRALKVFLANPNALFGTAFLALVIAVALLAPVLYPGDPLSMVGK 99
           P  R    + ++ T GR  L+     P  +FG A LA+++ VA+ AP++ P DP S V +
Sbjct: 9   PVPRRSALSRLSTTTGR-TLRKLADEPLGMFGFAILAILVLVAVFAPLIAPFDPASQVLE 67

Query: 100 PFLWPGQHPAFPLGTDSLGRDVLAGILHGSRISLFVGLMATALGLTFGVVVGAIAGYFSG 159
             L P    A   GTD  GRD+ + +++G+RI++   L  + +    G+ +G +AG+F G
Sbjct: 68  NALQPPSW-AHLAGTDEFGRDIFSRLVYGTRITIQTVLSVSIIVGPIGLAIGVMAGFFGG 126

Query: 160 WIDDLLVRLIEIFQTLPSFVLLVVLVAIVQPSATTVTLAIAVISWPTVARLTRAEFRAIR 219
             D +L+R  +I  + PS VL +   A +     T  +AI++ +WP +ARL RAE   +R
Sbjct: 127 RTDAILMRATDIVLSFPSLVLALAFAAAMGAGLGTAIIAISLTAWPPIARLARAEALVVR 186

Query: 220 EKDFVMAARSLGFGHGRIIVREILPNALPPIIVTSSVMVATAILMESALSFMGLG-DPNV 278
             D+V AAR  G    RI+   I P  +P +IV  ++ +A  IL  ++L F+GLG  P +
Sbjct: 187 NTDYVAAARLYGASPLRILFLYIAPMCIPSVIVRLTLNMAGIILTAASLGFLGLGAQPPL 246

Query: 279 VSWGSMIGTGRELVRTAWYLTALPGLAIVFTVLALNLIGDGLNDALNPR 327
             WG+MI +GR+ +   W++  +PG+AI+ T LA N+ GD L D L+PR
Sbjct: 247 PEWGAMISSGRKFMLDYWWVAVMPGIAILLTSLAFNIAGDTLRDLLDPR 295