Pairwise Alignments

Query, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 536 a.a., Periplasmic dipeptide transport protein from Xanthobacter sp. DMC5

 Score =  389 bits (999), Expect = e-112
 Identities = 213/520 (40%), Positives = 307/520 (59%), Gaps = 6/520 (1%)

Query: 24  ATATAMPVLPVPSFAAEEPTRGGSVSINIGTEPPVLVLIAHSAGAAYYISGKATESLLSY 83
           A   ++  +P+   A   P RGG +   +  EP  L L    +     I+    + L++Y
Sbjct: 12  AAGASLAAVPMARAADGSPVRGGHLVSIVVPEPQTLGLTV--SNPTIVIAINVYDGLVTY 69

Query: 84  DKDFNPQPLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSIL-ALKENHPRGR 142
           D    P+P LA  +  + DG    F+LR+ V WHDG  FTA  V +SIL  +K+ HPRG 
Sbjct: 70  DGTGAPRPQLAESYEQAPDGRSITFRLRKGVTWHDGVPFTAADVKYSILEVVKKTHPRGI 129

Query: 143 ATFAHVKEANVLNSHEVELTLAKPAPYLLTAFASFEAPIVPKHLYEGTKIAENPHNVAPV 202
            T++ +++    + H V L LAKP+P + +A  S E  I+PKHLYEGT    NP N  P+
Sbjct: 130 GTYSQLQDIETPDDHTVILRLAKPSPVIWSALNSSETQILPKHLYEGTDPLTNPWNTKPI 189

Query: 203 GTGPYKFVEWVRGSHALFVRNEDYWGSPKPYLDQIIFRFIVDPAAAVAAIETGEVQ-VST 261
           GTGP+ F EWVRGSH    RN +YW + KPYLD++ FRF+ D  A  AA+ETGE Q V  
Sbjct: 190 GTGPFIFKEWVRGSHVTLERNPNYWDAGKPYLDRLTFRFVPDAGARAAALETGEAQYVPL 249

Query: 262 ANLPLTDIDRLKANPNLVVDTDPAPYSPSIARAEFNLENKYLADIKVRHAIAHAVDKDFI 321
           + +PL+D++RL   P+LVV+T        +   +FN+      D++VR AIA A+DK  +
Sbjct: 250 SPVPLSDVERLAKRPDLVVETRGWEAVAPVFFLDFNMRRPQFQDVRVRRAIALAIDKKAL 309

Query: 322 VNTVYLGYATRLDGPVSPDLAKFYSPDLPKYEFDPAKSEKLLDEAGYARGADGFRFKLFI 381
             TV+ G+A    GPV      F +  LP+Y++DP K+E LLDEAG  RG DG R + F 
Sbjct: 310 ARTVWYGFAEPATGPVPAFQTAFAATGLPQYDYDPKKAEALLDEAGLKRGPDGVRLR-FN 368

Query: 382 DPTQPSGPP-KQTAEYIAQALAKVGIKVELRTQDFATFVKRVFTDRDFDIAIEGMSNLYD 440
             + P G   K++ E+I Q L KVGI+VEL   D  TF+++++T+ DFD      +   D
Sbjct: 369 HVSIPYGDDFKRSGEFIRQQLKKVGIEVELLNYDLPTFLRKIYTEYDFDTLNAYYAAFAD 428

Query: 441 PTVGVQRLYWSKNFKPGVPFTNGSKYSNPEVDRLLETAAVEIDPKKRLELFNEFQKLVVE 500
           P +GVQR +WS+  +PG  ++N S YSNP+VD LLE AAVE DP+KR  L  EFQ +V  
Sbjct: 429 PQIGVQRRFWSQTIRPGSAWSNASGYSNPKVDALLEAAAVEPDPQKRKALLGEFQLIVQT 488

Query: 501 DLPTLDIVTPAVITVYDKRVKNLKLGVEHLWSNGADIYLD 540
           +LP++ ++      V+  R+K + +G   ++S+ AD +L+
Sbjct: 489 ELPSISLLELKQFRVWSSRLKGVNVGPIGVYSSFADAWLE 528