Pairwise Alignments

Query, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 527 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  147 bits (370), Expect = 1e-39
 Identities = 148/523 (28%), Positives = 229/523 (43%), Gaps = 36/523 (6%)

Query: 23  LATATAMPVLPVPSFAAEEPTRGGSVSINIGTEPPVLVLIAHSAGAAYYISGKAT--ESL 80
           +A A  +  L   S  A   T      I I  +   L L  HS   +  +S  A   E+L
Sbjct: 7   VAAAAVLCALGAVSMVASAQT------IRIANQGDALSLDPHSLNESLQLSVTANVYETL 60

Query: 81  LSYDKDFNPQPLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSILALKENHPR 140
           +  +KD +  PLLAT W  +   + + F+LR+ V +HDG  FTA+ V FS    + +   
Sbjct: 61  VGRNKDLSLAPLLATSWKQTSPNV-WRFELRKGVVFHDGTPFTADDVVFSFARAQGDGSD 119

Query: 141 GRATFAHVKEANVLNSHEVELTLAKPAPYL-----LTAFAS---FEAPIVPKHLYEGTKI 192
            RAT + +K    +    VE+    P P L     LT   S    E     K + +  K 
Sbjct: 120 MRATLSDIKAVRKVGDLAVEIETNGPFPILPDVISLTMIMSKKWCEENQATKPV-DRRKG 178

Query: 193 AENPHNVAPVGTGPYKFVEWVRGSHALFVRNEDYWGSPKPYLDQIIFRFIVDPAAAVAAI 252
            EN  +    GTGP++  E       +F RN  YWG       ++IF  I +PA  VAA+
Sbjct: 179 IENTASFKANGTGPFRVRERQPNVRTVFTRNGTYWGKIDGNAQEVIFTPIANPATRVAAL 238

Query: 253 ETGEVQVSTANLPLTDIDRLKANPNLVVDTDPAPYSPSIARAEFNLENKY--------LA 304
            +GEV V    +P+ DI R+ A PN  V T P   +  +   +   E +Y          
Sbjct: 239 VSGEVDVMEP-VPVQDIARINAAPNARVITGPEMRTIFLGMDQKRDELQYSNVKGKNPFK 297

Query: 305 DIKVRHAIAHAVDKDFIVNTVYLGYATRLDGPVSPDLAKFYSPDLPKYEFDPAKSEKLLD 364
           D +VR A   A+D   I  TV  G +      V P +  + +    +  +D   ++KLL 
Sbjct: 298 DKRVRQAFYQAIDIAGIQRTVMRGASRPTALLVGPGINGWTAEQDKRLPYDVEAAKKLLT 357

Query: 365 EAGYARGADGFRFKLFID-PTQPSGPPKQTAEYIAQALAKVGIKVELRTQDFATFVKRVF 423
           EAGY  G     F++ ++ P        Q  + +A  LAK+G+K+ L  +   T+  +V 
Sbjct: 358 EAGYPNG-----FEVSLNCPNDRYVNDGQICQSVASNLAKIGVKINLVAETKGTYFPKVL 412

Query: 424 TDRDFDIAIEGMS-NLYDPTVGVQRLYWSKNFKPGVPFTNGSKYSNPEVDRLLETAAVEI 482
             RD    + G +   YD    +  L    + K    F  G+ Y NP++D L +    E 
Sbjct: 413 R-RDTSFYMLGWTPTTYDSHNALSSLTSCPDDKGTGQFNLGA-YCNPKLDELTKKIQSEG 470

Query: 483 DPKKRLELFNEFQKLVVEDLPTLDIVTPAVITVYDKRVKNLKL 525
           D  KR E+  E  K+  +D+  L +   ++     K+V+ ++L
Sbjct: 471 DKDKRNEMIKEAFKIHADDVGHLPLHQQSLAWGVSKKVELVQL 513