Pairwise Alignments

Query, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 530 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  474 bits (1221), Expect = e-138
 Identities = 236/519 (45%), Positives = 346/519 (66%), Gaps = 9/519 (1%)

Query: 24  ATATAMPVLPVPSFAAEEPTRGGSVSINIGTEPPVLVLIAHSAGAAYYISGKATESLLSY 83
           A   A+ VL   + AA+ P +GG+++  +   P  +V +  +AG    I  K  E LL+Y
Sbjct: 14  AAVAAIAVLAAWTVAAQ-PRQGGTLTWLVNPVPASIVPLTTTAGGNAEIGPKIVEGLLTY 72

Query: 84  DKDFNPQPLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSILALKENHPRGRA 143
           D D  P+PLLAT W+ S+DGL+Y F+LR+ V+WHDG+DFT+  VAFSIL LK+ HPRGR 
Sbjct: 73  DYDLKPKPLLATAWSQSKDGLQYTFELRKGVKWHDGKDFTSADVAFSILTLKQVHPRGRG 132

Query: 144 TFAHVKEANVLNSHEVELTLAKPAPYLLTAFASFEAPIVPKHLYEGTKIAENPHNVAPVG 203
           TFA+V +    +++   + L+KP+P+LLTA AS E+PIVPKHLYEGT IA N +N APVG
Sbjct: 133 TFANVVDVKTPDANTAVIVLSKPSPFLLTALASTESPIVPKHLYEGTDIASNKYNSAPVG 192

Query: 204 TGPYKFVEWVRGSHALFVRNEDYWGSPKPYLDQIIFRFIVDPAAAVAAIETGEVQVS--T 261
           TGP+ F EWV+GSH +  RN +YW  PKPYLD+++ RF++D AA  AA+E+G   ++  T
Sbjct: 193 TGPFVFKEWVQGSHIILERNPNYWDKPKPYLDRVVVRFVLDSAARAAALESGAADLANGT 252

Query: 262 ANLPLTDIDRLKANPNLVVDTDPAPYSPSIARAEFNLENKYLADIKVRHAIAHAVDKDFI 321
             +PL+D++R    P + +DT  +PY  S  +  FNL+   L  ++VR AIA A+D +  
Sbjct: 253 GGIPLSDVERFGKLPGVQIDTRISPYLGSHQQIYFNLDTPALQKLEVRRAIAQAIDVNAF 312

Query: 322 VNTVYLGYATRLDGPVSPDLAKFYSPDLPKYEFDPAKSEKLLDEAGYARGADGFRFKLFI 381
             TV+ GY T    P+   +++++   +  Y F+P ++E  LD AG+ RGA G R KL +
Sbjct: 313 AKTVWYGYGTLSASPIGKGISRYHDASIQPYPFNPKEAEAALDAAGFKRGAGGTRLKLRV 372

Query: 382 --DPTQPSGPPKQTAEYIAQALAKVGIKVELRTQDFATFVKRVFTDRDFDIAIEGMSNLY 439
             +P Q     ++ A+++ Q+L ++GI   + + DFAT+V + +TDR FDI +E ++NL+
Sbjct: 373 LYNPFQ----ERRAADFVRQSLGRIGIDATVESYDFATYVTKAYTDRAFDITLESLTNLF 428

Query: 440 DPTVGVQRLYWSKNFKPGVPFTNGSKYSNPEVDRLLETAAVEIDPKKRLELFNEFQKLVV 499
           DPTVGVQR++WSKNFK G+PF+N + Y NPEVDRLLE AAVE+D  KR +LF +FQ +V 
Sbjct: 429 DPTVGVQRVFWSKNFKVGLPFSNAAHYVNPEVDRLLEAAAVEVDEGKRRQLFVDFQNIVH 488

Query: 500 EDLPTLDIVTPAVITVYDKRVKNLKLGVEHLWSNGADIY 538
            D+P++++     ITV  K+V++     EH+  + AD+Y
Sbjct: 489 RDIPSIELGANPAITVATKKVRDYAPTGEHIRGSFADLY 527