Pairwise Alignments

Query, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 542 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  529 bits (1363), Expect = e-155
 Identities = 271/532 (50%), Positives = 358/532 (67%), Gaps = 6/532 (1%)

Query: 13  RRAFLLSSVALATATAMPVLPV--PSFAAEEPTRGGSVSINIGTEPPVLVLIAHSAGAAY 70
           RR FL    +L  A     +P    + AA  P RGG++++ I  EPP L  IAHSAG++ 
Sbjct: 10  RRHFLQGGASLGVAALAGPMPAWAQAPAAGSPVRGGTLTVLIDPEPPTLTTIAHSAGSSV 69

Query: 71  YISGKATESLLSYDKDFNPQPLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFS 130
            IS K TE LL+YD D +PQP LAT WTVS DGL+Y F LR+ VRWHDG+ FT+  VA S
Sbjct: 70  LISAKTTEGLLTYDFDLSPQPQLATAWTVSADGLQYTFTLRRGVRWHDGKPFTSADVAHS 129

Query: 131 ILALKENHPRGRATFAHVKEANVLNSHEVELTLAKPAPYLLTAFASFEAPIVPKHLYEGT 190
           I  LK+ HPRGRATF+ V E    +++   L L+KP PYLLTA ++ E+PIVP+HLYE  
Sbjct: 130 IGLLKQYHPRGRATFSSVAEVRTPDAYTAVLVLSKPVPYLLTALSASESPIVPRHLYESG 189

Query: 191 KIAENPHNVAPVGTGPYKFVEWVRGSHALFVRNEDYWGSPKPYLDQIIFRFIVDPAAAVA 250
           K   NP N AP+GTGP+ F EWVRGSH  + RN DYW +PKPY+D++I RFI D AA  A
Sbjct: 190 KADANPANNAPIGTGPFVFKEWVRGSHVTYERNPDYWDNPKPYVDRLIVRFIPDAAARAA 249

Query: 251 AIETGEVQVSTAN-LPLTDIDRLKANPNLVVDTDPAPYSPSIARAEFNLENKYLADIKVR 309
           AIE GEV +S    +PL D++RL+A PNLV + +   Y  +++R EFNLEN  L D++VR
Sbjct: 250 AIEKGEVHLSPGTPVPLGDVERLRAKPNLVFEPNGYQYINNVSRVEFNLENPALQDLRVR 309

Query: 310 HAIAHAVDKDFIVNTVYLGYATRLDGPVSPDLAKFYSPDLPKYEFDPAKSEKLLDEAGYA 369
            AIAHA+++  +  TV+ G    + GPV P L KFY PDLP    D  ++E LLD AG+ 
Sbjct: 310 QAIAHAINRQVVQKTVWYGQGQLIPGPVHPALRKFYVPDLPVLPHDVKRAEALLDAAGFV 369

Query: 370 RGADG--FRFKLFIDPTQPSGPPKQTAEYIAQALAKVGIKVELRTQDFATFVKRVFTDRD 427
           RG  G   R KL + P    G  ++TAEY+ Q+L ++GI+V + +QDFAT+V+RV+ DR 
Sbjct: 370 RGKAGGNLRLKLAVVPISNEG-GQRTAEYLKQSLGRIGIEVTIHSQDFATYVRRVYADRA 428

Query: 428 FDIAIEGMSNLYDPTVGVQRLYWSKNFKPGVPFTNGSKYSNPEVDRLLETAAVEIDPKKR 487
           FD+ +  MSN +DPTVG+QRLYWSKNFK G+PF+NGS YSNPEVDRLLE AAVEID  +R
Sbjct: 429 FDLHVSVMSNTFDPTVGIQRLYWSKNFKKGLPFSNGSGYSNPEVDRLLEAAAVEIDEGRR 488

Query: 488 LELFNEFQKLVVEDLPTLDIVTPAVITVYDKRVKNLKLGVEHLWSNGADIYL 539
            + F EFQ+ +V DLP + ++     T+ D+RV+   +  + +  N A  ++
Sbjct: 489 RQAFAEFQRHIVRDLPDITLLAIDNYTIADRRVRGHTVSADGIAGNLAGAWI 540