Pairwise Alignments

Query, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 495 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  144 bits (363), Expect = 8e-39
 Identities = 137/508 (26%), Positives = 219/508 (43%), Gaps = 44/508 (8%)

Query: 23  LATATAMPVLPVPSFAAEEPTRGGSVSINIGTEPPVLVLIAHSAGA-AYYISGKATESLL 81
           L TA A   L  P  A     R  ++ I +  EPP L   + +A A A  +     E+L 
Sbjct: 8   LTTAGATVALATP-LAGMAQGRKDAIVIGMALEPPGLDPTSGAAAAIAEVVQYNILETLT 66

Query: 82  SYDKDFNPQPLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSI--LALKENHP 139
             + D +  PLLA  W VS D   Y FKL++ V++ +G  F A AV FS      +++  
Sbjct: 67  KINADGSVTPLLADSWEVSPDLKTYTFKLKRGVKYQNGEPFNAAAVKFSFDRAGSEKSTN 126

Query: 140 RGRATFAHVKEANVLNSHEVELTLAKPAPYLLTAFASFEAPIVPKHLYEGTKIAENPHNV 199
           + + TFA++    V++ + V +   +  P L        A IV     EG          
Sbjct: 127 KDKRTFANLS-TQVVDDYTVVVINKEIDPDLPFVLGQATAVIVEPKSAEGNA-------T 178

Query: 200 APVGTGPYKFVEWVRGSHALFVRNEDYWGSPKPYLDQIIFRFIVDPAAAVAAIETGEVQV 259
            PVGTGPYK   W +GS     + E +       ++++ FRFI D AA  AA+ +G++ V
Sbjct: 179 KPVGTGPYKLDNWAKGSSITLSKWEGFRSPATAKINKVTFRFISDTAAQAAAVLSGDIDV 238

Query: 260 STANLPLTDIDRLKANPNLVVDTDPAPYSPSIARAEFNLEN--KYLADIKVRHAIAHAVD 317
               +    + + K NP   V       + S A+   ++ N  K L D++VR AI  A+D
Sbjct: 239 -FPRIGTRVVPQFKMNPQFQV-----ILAGSRAKTILSINNRKKPLDDVRVRRAILAAID 292

Query: 318 KDFIVNTVYLGYATRLDGPVSPDLAKFYSPDLPKYEFDPAKSEKLLDEAGYARGADGFRF 377
           +  ++     G+   +     P  A  Y        FD  K++KLL EA       G + 
Sbjct: 293 RKAVIEGAADGFGVPIGSHYVPGAAG-YVDTTGINPFDIEKAKKLLAEA-------GVKT 344

Query: 378 KLFIDPTQPSGP-PKQTAEYIAQALAKVGIKVELRTQDFATFVKRVFTDRDFDIAIEGMS 436
            L +  T P  P  +Q  E I   LAK+GI V+++  ++A ++   + ++D+D++I    
Sbjct: 345 PLELKMTLPPPPYARQGGEVIVAELAKIGIVVKVQNVEWAQWLSGTYGNKDYDLSIVSHV 404

Query: 437 NLYD-PTVGVQRLYWSKNFKPGVPFTNGSKYSNPEVDRLLETAAVEIDPKKRLELFNEFQ 495
             +D         YW               Y +   D L +      +  +R +L  + Q
Sbjct: 405 EPFDLGNYAKSDYYWG--------------YQSKAFDTLFDKIKTTANTAERNKLLGDAQ 450

Query: 496 KLVVEDLPTLDIVTPAVITVYDKRVKNL 523
           K++  D     +  P   TV  K VK +
Sbjct: 451 KMLATDAANGFLYQPQFPTVAKKNVKGI 478