Pairwise Alignments

Query, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 521 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  168 bits (425), Expect = 5e-46
 Identities = 128/433 (29%), Positives = 217/433 (50%), Gaps = 34/433 (7%)

Query: 90  QPLLATEWTVSEDGLRYW-FKLRQDVRWHDGRDFTAEAVAFSILALKENHPRGRATFAH- 147
           +P LA+ W   +D  + W FKLR D++W DG  F+A+ + FS    + N P   A+++  
Sbjct: 66  EPALASSWKALDD--KTWEFKLRTDIKWQDGTPFSADDIVFSFQRSR-NVPGSVASYSGA 122

Query: 148 ---VKEANVLNSHEVELTLAKPAPYLLTAFASFEAPIVPKHLYEGTKIAENPHNVAPVGT 204
              V+     +   + +    P P L    AS    IV KH+ E +K  +     A VGT
Sbjct: 123 LRTVESVTAKDPATLIVKTNTPNPMLPLEIASIY--IVSKHVGEKSKTEDYNAGRAVVGT 180

Query: 205 GPYKFVEWVRGSHALFVRNEDYWGSPKPYLDQIIFRFIVDPAAAVAAIETGEVQVSTANL 264
           GPYKFV +V G   +F RN  Y+G PKP  +++ +RFI + AA  AA+  G+V V    +
Sbjct: 181 GPYKFVSYVPGDRTVFERNPGYYG-PKPLWEKVNYRFINNGAARTAALLAGDVDV-IDKV 238

Query: 265 PLTDIDRLKANPNLVVDTDP-------------APYSPSIARAEFNLENKYLADIKVRHA 311
            +TD+++L+ +P + V T P              P       A   LE   L D++VR A
Sbjct: 239 AVTDVEKLRKDPKVSVYTYPGLRVLLLQPTFKAGPNEFITDNAGKPLEKNPLLDVRVRQA 298

Query: 312 IAHAVDKDFIVNTVYLGYATRLDGPVSPDLAKFYSPDLPKYEFDPAKSEKLLDEAGYARG 371
           ++ A+++  IV+ V  G  T  +    P  +  Y+PD+    ++  +++KLL EAG+ + 
Sbjct: 299 LSLAINRKAIVDRVLQGTVTEAN-QWMPKGSFGYNPDVKDIAYNAEQAKKLLAEAGFPQ- 356

Query: 372 ADGFRFKLFIDPTQ-PSGPPKQTAEYIAQALAKVGIKVELRTQDFATFVKRVFTDRDFDI 430
             GF+  + +   + P  P  +T + +AQ  +++G+K ++    +A +  R     ++ +
Sbjct: 357 --GFQIAIHVPGDRYPQAP--ETVQAVAQFWSRIGVKTKVEVVPWAVYSGRA-NKNEYAV 411

Query: 431 AIEGMSN-LYDPTVGVQRLYWSKNFKPGVPFTNGSKYSNPEVDRLLETAAVEIDPKKRLE 489
           ++    N   +   G+ +   + + K G    N  +YSN  VD+ L+ A VE D K+R  
Sbjct: 412 SVIAWGNGTGEAGYGLLQTLTTPDAKRGRGSNNWGRYSNESVDKALDAATVEFDAKRREA 471

Query: 490 LFNEFQKLVVEDL 502
           +F    KLV +D+
Sbjct: 472 IFRHAAKLVTDDV 484