Pairwise Alignments

Query, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  142 bits (357), Expect = 4e-38
 Identities = 143/543 (26%), Positives = 226/543 (41%), Gaps = 68/543 (12%)

Query: 14  RAFLLSSVALATATAMPVLPVPSFAAEEPTRGGSVSINIGTEPPVLVLIAHSAGAAYYIS 73
           R  LL+ V  A     P L      A++  +GG +++    +   L      A    + +
Sbjct: 2   RNLLLAGVCTAALMGNPAL------ADDIKQGGEMTVTYKDDVSTL----DPAIGYDWQN 51

Query: 74  GKATESLLSYDKDFNP-----QPLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVA 128
               +SL     D+ P     +P LA  + +SEDG  + FKLR+ V++H+GR+ TA+ V 
Sbjct: 52  WSMIKSLFDGLMDYVPGTTELRPDLAESYEISEDGKIFTFKLRKGVKFHNGRELTAQDVK 111

Query: 129 FSI--LALKENHPRGRATFAHVK---EAN-----------VLNSHEVELTLAKPAPYLLT 172
           +SI  +        G   FA +K   EA+           V + H +   L +P    L 
Sbjct: 112 YSIERVVNPATQSPGAGFFATIKGVEEASAGKGGELSGITVQDPHTIRFELTRPDATFLH 171

Query: 173 AFASFEAPIVPKHLYE--GTKIAENPHNVAPVGTGPYKFVEWVRGSHALFVRNEDYWGSP 230
             A   A +VPK   E  G    +NP     VG+G +K  EW  G   +F R  DYW   
Sbjct: 172 VMALNFAHVVPKEEVEKHGADFGKNP-----VGSGAFKLAEWTLGQRLVFERFTDYWNEG 226

Query: 231 KPYLDQIIFRFIVDPAAAVAAIETGEVQVSTANLPLTDIDRLKANPNLVVDTDPAPYSPS 290
            P LD+I F    +P  A+  ++ GE+ V    +P      +  +PN   D         
Sbjct: 227 LPKLDRITFEVGQEPVVALLRLQNGEIDVPGDGIPPAKFVEVTNDPNF-KDLIIRGGQLH 285

Query: 291 IARAEFNLENKYLADIKVRHAIAHAVDKDFIVNTVYLGYATRLDGPVSPDLAKFYSPDLP 350
                 N++      ++VR A+  A++KD I+  +  G A   + P+ P +   Y+ D  
Sbjct: 286 TGYVTMNVKMAPFDKVEVRKAVNMAINKDRILRIIN-GRAVAANQPLPPSMPG-YAKDYA 343

Query: 351 KYEFDPAKSEKLLDEAGYARGADGFRFKLFIDPTQPSGPPKQTAEYIAQALAKVGIKVEL 410
            Y +DP  ++KLL++AG     DGF  +L++  T P     + A+ I Q L  +GI   +
Sbjct: 344 GYAYDPEGAKKLLEQAGL---GDGFSTELYVMNTDPQ---PRIAQAIQQDLKAIGITASI 397

Query: 411 RTQDFATFVKRVFTDRDFDIAIEG----------MSNLYDPTVGVQRLYWSKNFKPGVPF 460
           ++   A  +     +    +   G           SN Y P +G           PG   
Sbjct: 398 KSLAQANVIAAGGEENQAPMIWSGGMAWIADFPDPSNFYGPILG------CGGAVPG--G 449

Query: 461 TNGSKYSNPEVDRLLETAAVEIDPKKRLE---LFNEFQKLVVEDLPTLDIVTPAVITVYD 517
            N S Y N E+D+    A    DP K  E   L+ +    ++ED P   I      T+  
Sbjct: 450 WNWSWYCNEELDKKAAEADAIADPAKAAEREALWRDIYLKIMEDAPWAPIFNEERFTIRS 509

Query: 518 KRV 520
           +R+
Sbjct: 510 ERI 512