Pairwise Alignments

Query, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 519 a.a., ABC transporter substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  148 bits (374), Expect = 4e-40
 Identities = 131/429 (30%), Positives = 201/429 (46%), Gaps = 35/429 (8%)

Query: 93  LATEW-TVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSI--LALKENHPRGRATFA-HV 148
           LAT+W TVSE   R  F LR  V+WHDG+ FT++ V F++       N P G   F  ++
Sbjct: 70  LATKWDTVSETKWR--FALRDGVKWHDGKPFTSDDVIFTLDRAGSVPNSPGGFGGFMRNI 127

Query: 149 KEANVLNSHEVELTLAKPAPYLLTAFASFEAPIVPKHLYEGTKIAENPHNVAPVGTGPYK 208
                   + V ++   PAP L    A+    IV +H  EG   A+     A +GTG ++
Sbjct: 128 ASVEADGDNAVIISTKAPAPTLPGDLANIA--IVSRHAGEGADTADYNSGKAAIGTGAFR 185

Query: 209 FVEWVRGSHALFVRNEDYWGSPKPYLDQIIFRFIVDPAAAVAAIETGEVQVSTANLPLTD 268
              + +G      RN D+WG  K   D   +R I   +A   A   G+V V  A    TD
Sbjct: 186 LTTFKQGIEVGLERNPDWWGK-KVAWDHATYRMISSASARTTAALAGDVDVIDAP-AATD 243

Query: 269 IDRLKANPNLVVDTDP-------APYSPSIARAEF-------NLENKYLADIKVRHAIAH 314
           I R K   NL   + P       AP +   A   F        L+N  LAD +VR+A++ 
Sbjct: 244 IARFKTTANLSFVSTPGLRVIYLAPSTSGDAWKAFVKGPKGEALDNNPLADPRVRNALSE 303

Query: 315 AVDKDFIVNTVYLGYATRLDGPVSPDLAKFYSPDLPKYEFDPAKSEKLLDEAGYARGADG 374
           A++++ IV+ +  G AT   G   P  A  Y+PD+   + D A ++KLL +AGY    DG
Sbjct: 304 AINREGIVDKIMEGTAT-ASGQWLPKGAFSYTPDIQPPKPDAAGAKKLLADAGY---PDG 359

Query: 375 FRFKLFI-DPTQPSGPPKQTAEYIAQALAKVGIKVELRTQDFATFVKRVFTDRDFDIAIE 433
           F+  + + +   P+ P     + +AQ   ++G+K  +    + TF  R     +F + + 
Sbjct: 360 FQLTVHVPNDRYPNAP--AVVQAVAQMWTRIGVKTNVEALPWTTFSSR---KSEFAMKLL 414

Query: 434 GMSN-LYDPTVGVQRLYWSKNFKPGVPFTNGSKYSNPEVDRLLETAAVEIDPKKRLELFN 492
           G+ N  YD +  +  +  + + K G+   N S YSNP +D L+  A +  D K R     
Sbjct: 415 GLGNATYDASSMLVNVLGTVDPKRGLGAANDSGYSNPALDDLVSKAMMIYDDKAREAALI 474

Query: 493 EFQKLVVED 501
           E  K+ + D
Sbjct: 475 EAVKVAITD 483