Pairwise Alignments

Query, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 553 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  181 bits (458), Expect = 8e-50
 Identities = 133/442 (30%), Positives = 218/442 (49%), Gaps = 22/442 (4%)

Query: 99  VSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSILALKENHPRGRATFAH--VKEANVLNS 156
           +S DGL +  KLR DV+WHDG+ FTAE V F++  L + + R      H  V++  V++ 
Sbjct: 106 ISADGLAWKVKLRDDVKWHDGKPFTAEDVKFTLELLVDPNFRSWRKTGHEFVRDLTVVSP 165

Query: 157 HEVELTLAKP-APYLLTAFASFEAPIVPKHLYEGTKIAEN--PHNVAPVGTGPYKFVEWV 213
            E+   + KP APY     ++F   I PKHL  G +   N   +N APVGTG +K+ E V
Sbjct: 166 TEITWKMEKPFAPYPSILASTF---ITPKHLL-GAEADRNTAAYNNAPVGTGAFKWKERV 221

Query: 214 RGSHALFVRNEDYWGSPKPYLDQIIFRFIVDPAAAVAAIETGEVQVSTANLPLTD-IDRL 272
            G + L   N DY+G   P+++++I++++ D        +TG++ V        D  D  
Sbjct: 222 AGDYILLEANADYFGD-GPHIERLIYKYVPDLNVLYTQFKTGDIDVVGLQWITPDHYDEA 280

Query: 273 KANPNLVVDTDPAPYSPSIARAEFNLENKYLADIKVRHAIAHAVDKDFIVNTVYLGYATR 332
           K     VV+  P     +I    FN+E     D  VR A+  A+DK  I+  +Y G    
Sbjct: 281 KDLSGKVVNVVP---GSTIESLSFNMERPQFKDPAVREALYAAIDKQSIIEALYYGLPAP 337

Query: 333 LDGPVSPDLAKFYSPDLPKYEFDPAKSEKLLDEAGYARGADGFRFK------LFIDPTQP 386
            +  V P  + +Y+PDLPK+E+   +++KLL++AG+  GADG R K           T  
Sbjct: 338 TESYV-PQQSFYYNPDLPKHEYSIERAKKLLEDAGWVAGADGVRAKDGVKLAFTCSTTAG 396

Query: 387 SGPPKQTAEYIAQALAKVGIKVELRTQDFATFVKRVFTDRDFDIAIEGMSNLYDPTVGVQ 446
           +   +Q  +YI Q+   +G+++ +     A      +    FD  I G+  L  P     
Sbjct: 397 NHIREQVQQYIQQSFKDIGVEMTISNLPPAVMWGDYWMLSKFDSVIVGLDFLTGPDPDTS 456

Query: 447 RLYWSKNF-KPGVPFTNGSKYSNPEVDRLLETAAVEIDPKKRLELFNEFQKLVVEDLPTL 505
             + S +    G    N  +++N EVD LL        P++R  ++ + Q+++ ++LP L
Sbjct: 457 DFFRSTSSPAKGGSGQNTWQFANKEVDELLAKGGSLFVPEERKAVYLKIQEIMRKELPLL 516

Query: 506 DIVTPAVITVYDKRVKNLKLGV 527
            +   A +  + + V+N+K  V
Sbjct: 517 PLFQYATVRGHKQGVENVKPNV 538