Pairwise Alignments

Query, 481 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 464 a.a., DNA repair protein RadA from Variovorax sp. SCN45

 Score = 48.9 bits (115), Expect = 4e-10
 Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 23/203 (11%)

Query: 257 SGVDTLDEMFGGGQESGTTTLVIGQAGTGKSTMASLYATAALKRGESVGLFLF-EERIET 315
           +G+D LD + GGG  SG  TL+ G  G GKST+  L A  AL+R     L++  EE    
Sbjct: 79  TGLDELDRVLGGGIVSGGVTLIGGDPGIGKSTLL-LQAVDALQRAGQNALYVTGEESGSQ 137

Query: 316 FFRRSEGLGMALRQFHEDGQLILRDFNPNEISPGEFGQIVQQSVNSEKVKVVVIDS---- 371
              RS+ LG+   Q     ++ L              + +  ++++ +  + VIDS    
Sbjct: 138 VALRSKRLGLDHSQVQVLAEIQL--------------EKIIATLDATRPAIAVIDSIQTV 183

Query: 372 FTGYLNSLPHREKAVRDIQSLLKYLARAGVLTILIVAQHGLLGQGVGIDVDVSFLGDTVL 431
           ++  L S P     VR+  + L   A+     +++V      G   G  V +  + DTVL
Sbjct: 184 YSDQLTSAPGSVAQVRECAAHLTRFAKTSGTAVVLVGHVTKEGALAGPRV-LEHMVDTVL 242

Query: 432 LLRIAEHEGRLRRSITVVKKRHG 454
                 H     R +  +K R G
Sbjct: 243 YFEGDTHSS--FRLVRAIKNRFG 263



 Score = 42.4 bits (98), Expect = 3e-08
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 6/113 (5%)

Query: 14  SGISGLDEILRGGLPASNLYIVQGAPGSGKTTAALQFLRAGVALGEPCIYV----SLSQT 69
           +G+  LD +L GG+ +  + ++ G PG GK+T  LQ + A    G+  +YV    S SQ 
Sbjct: 79  TGLDELDRVLGGGIVSGGVTLIGGDPGIGKSTLLLQAVDALQRAGQNALYVTGEESGSQV 138

Query: 70  RAELEAIALSHG--WTLDGIRVEELSASDSINRAADQTIFQTTELRLDETRKA 120
               + + L H     L  I++E++ A+    R A   I     +  D+   A
Sbjct: 139 ALRSKRLGLDHSQVQVLAEIQLEKIIATLDATRPAIAVIDSIQTVYSDQLTSA 191