Pairwise Alignments

Query, 481 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 504 a.a., gas vesicle protein GvpD from Paraburkholderia sabiae LMG 24235

 Score =  356 bits (914), Expect = e-103
 Identities = 182/459 (39%), Positives = 282/459 (61%), Gaps = 4/459 (0%)

Query: 12  VSSGISGLDEILRGGLPASNLYIVQGAPGSGKTTAALQFLRAGVALGEPCIYVSLSQTRA 71
           +S+G+ GLD++L GGL A+ +Y+++G PG+GKTT  L FL  G+  GEP +Y++LS+T A
Sbjct: 18  ISTGVPGLDDVLNGGLVANRVYLIEGVPGAGKTTLGLHFLLEGMRRGEPGLYITLSETAA 77

Query: 72  ELEAIALSHGWTLDGIRVEELSASDSINRAADQTIFQTTELRLDETRKAIESAIEEHKPS 131
           EL A+A SH W+LDG+ + EL +++ +   A Q+I   +E+ L ET   +   +    P 
Sbjct: 78  ELRAVAASHHWSLDGLPIHELVSTEGLAAEAGQSILHPSEVELGETIDEVRRVVLSINPR 137

Query: 132 RLVYDSLLEIRLITADSPRFRRELIAFKAFLAQRNIVALLLDTQTSETDRTGEEVDGIAH 191
           R+V+DSL E+RL+  D+ ++RR+++A K F +       LLD +TS+      ++  I H
Sbjct: 138 RVVFDSLSELRLLAQDALKYRRQVLALKQFFSTLGCTLWLLDDKTSQPGDL--QLHSITH 195

Query: 192 GVIRLDKSLEEYGGVRRRIEVSKMRGVPVADGYHDMAIREGEGVVVFPRIVPGAAARTVK 251
           GVI LD+++  YG  +RR+ + KMRG+  A GYHD  +  G GV V+PR+V     R   
Sbjct: 196 GVIDLDQTVPAYGVEQRRLRIVKMRGIKFAGGYHDFRLDTG-GVTVYPRLVAAIHRRDFN 254

Query: 252 PQLIKSGVDTLDEMFGGGQESGTTTLVIGQAGTGKSTMASLYATAALKRGESVGLFLFEE 311
           P    +GV  LD + GGG   GT TL++G AG GK+T A   A +AL+RGESV   LF+E
Sbjct: 255 PSAQSTGVPELDALLGGGLTPGTNTLLVGPAGAGKTTTAIRCALSALERGESVKYLLFDE 314

Query: 312 RIETFFRRSEGLGMALRQFHEDGQLILRDFNPNEISPGEFGQIVQQSVNSEKVKVVVIDS 371
            +     R   L MAL  + E+GQL+L+  +P E+SPG+F  +V+  V +  V +VVIDS
Sbjct: 315 TLGILLSRCRQLDMALDSYIENGQLMLQQIDPAEMSPGQFSTLVRDGVENAGVSMVVIDS 374

Query: 372 FTGYLNSLPHREKAVRDIQSLLKYLARAGVLTILIVAQHGLLGQGVGIDVDVSFLGDTVL 431
              Y+ ++P     +  +  LL YL + G+ T++++ QHGL+G  V  D+D+S+L D +L
Sbjct: 375 LNAYMQAMPGHRYLLLQMHELLAYLNQQGITTLMVLGQHGLIG-NVASDIDLSYLSDALL 433

Query: 432 LLRIAEHEGRLRRSITVVKKRHGPHDLDVRELFIQSSGV 470
           + R  E  G +  +++V+K R G H+  +RE  +   G+
Sbjct: 434 VFRFFESAGEVLSALSVLKSRTGTHERTIREFRVGPGGL 472



 Score = 40.4 bits (93), Expect = 1e-07
 Identities = 50/211 (23%), Positives = 83/211 (39%), Gaps = 26/211 (12%)

Query: 252 PQLIKSGVDTLDEMFGGGQESGTTTLVIGQAGTGKSTMASLYATAALKRGESVGLFLFEE 311
           P  I +GV  LD++  GG  +    L+ G  G GK+T+   +    ++RGE  GL++   
Sbjct: 15  PPRISTGVPGLDDVLNGGLVANRVYLIEGVPGAGKTTLGLHFLLEGMRRGEP-GLYITLS 73

Query: 312 RIETFFRRSEGL------GMALRQF-------HEDGQLILRDFNPNEISPGEFGQIVQQS 358
                 R           G+ + +         E GQ IL   +P+E+  GE    V++ 
Sbjct: 74  ETAAELRAVAASHHWSLDGLPIHELVSTEGLAAEAGQSIL---HPSEVELGETIDEVRRV 130

Query: 359 VNSEKVKVVVIDSFTGYLNSLPHREKAVRDIQSLLKYLARAGVLTILI---------VAQ 409
           V S   + VV DS +          K  R + +L ++ +  G    L+         +  
Sbjct: 131 VLSINPRRVVFDSLSELRLLAQDALKYRRQVLALKQFFSTLGCTLWLLDDKTSQPGDLQL 190

Query: 410 HGLLGQGVGIDVDVSFLGDTVLLLRIAEHEG 440
           H +    + +D  V   G     LRI +  G
Sbjct: 191 HSITHGVIDLDQTVPAYGVEQRRLRIVKMRG 221