Pairwise Alignments

Query, 360 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 319 a.a., ribose ABC transporter, periplasmic ribose-binding subunit from Pseudomonas putida KT2440

 Score = 43.9 bits (102), Expect = 6e-09
 Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 14/203 (6%)

Query: 147 LILAVPSSPVISAAVEAVVERGLPVVHVVTRASVD----KG---EFVGIDNYAAGRTAAH 199
           L++A   S  + +AV+  +++G+ V+++  R   D    KG    FVG DN    R    
Sbjct: 96  LVIAPADSKALVSAVKKAMDQGVVVINIDNRLDPDLLKSKGISVPFVGPDNRKGARLVGD 155

Query: 200 FIARMARAEGPAVGLCHPIYQVH--RDRIRGFSDYFRDKPGPIAFDWLGFTRDEEHYSAE 257
           ++A      G  VG+   +      + R  GF D        I     G    ++  +  
Sbjct: 156 YLASQKLKAGDQVGIIEGVSTTTNAQQRTAGFKDAMDAAQMKIVSVQSGNWEIDKGNAVA 215

Query: 258 TLSTALEIYPNLVGLYNAGGANSAL--IDVLRRHRRGRDVLFVGHELTEYTRAALREGIM 315
             ++ L  YP+L  L  AG  + AL  +  +R   +   V  VG++     +  L +G +
Sbjct: 216 --ASMLNEYPDLKALL-AGNDSMALGAVSAVRAAGKTGQVQVVGYDNINAIKPMLEDGRV 272

Query: 316 DVVLDQAPEAQAQRALDLILRRI 338
              LDQA   QA   +   L+ +
Sbjct: 273 LATLDQAASQQAVYGIQAALKMV 295