Pairwise Alignments

Query, 265 a.a., Transglycosylase from Sinorhizobium meliloti 1021

Subject, 360 a.a., Membrane-bound lytic murein transglycosylase B from Variovorax sp. SCN45

 Score = 66.2 bits (160), Expect = 9e-16
 Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 34/254 (13%)

Query: 11  AAAGSLAFCLL---TCVAEAASCGKSAA----------GFQQWKVEFA-ETAKAAGVRGK 56
           AAA  LA C       VA+ +S G++AA            ++  ++FA E A   G+  +
Sbjct: 7   AAAALLAACCAWSTVAVAQKSSSGRAAAVNPVRGSTPYATREDAMQFADEVAARRGLDRE 66

Query: 57  GLAALLGAKYAVGTIRADRSVNKAFSGSVDDFMRRRG---GSAIISKGRSLKTANAALFG 113
            + A +G+   +  +   R +     G+V ++   R        I+ G     ANA    
Sbjct: 67  WVRATIGSARFLPNV--PRLMLPGPVGTVKNWQTYRSRFIDPVRIAAGVRFWRANADTLA 124

Query: 114 NIERKYDVPAGVLLAIWGMETGFGASMGNQNTVSAIVTLAYDCRRPQFFAPHAIAALKLV 173
             E+ Y VP  +++ I G+ET +G +MGN   + A+ TL++D  +    A    A  +  
Sbjct: 125 RAEQVYGVPPEIIVGIIGVETIYGRNMGNFRVIDALATLSFDFPQGHPRAAEREAFFRGE 184

Query: 174 DSGVLSARS---------VGAMHGEIGQTGFLPGNVLKYGVGSRN------MRDTSTALM 218
               LS  S         +G+  G +G   F+P ++ KY V          + +T+  + 
Sbjct: 185 LESFLSTESRTADDPLTPLGSYAGAMGMPQFMPSSIAKYAVDFDGDGRIDLVNNTADVIG 244

Query: 219 STANFLKAHGWRAG 232
           S AN+ KA GW+ G
Sbjct: 245 SVANYFKAFGWQRG 258