Pairwise Alignments

Query, 357 a.a., ROK family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 370 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 89/360 (24%), Positives = 152/360 (42%), Gaps = 43/360 (11%)

Query: 27  NERLVLSLLLQNEATTRLEIGEKTGLSAQTISVIVRSLEQEGLV--VRGEAQKGRVGPPT 84
           ++R +L +L ++   +R  +     +S   ++ + R L    LV  V G   +GR G P 
Sbjct: 9   DQRRILQMLRKSGPLSRSALASALEISGTALTRLSRDLIGLNLVEEVPGAEAQGR-GRPA 67

Query: 85  TPLMLNSEGAYSVGVSVGYHNTHIVVVDFIG-NVQHHRVMPHKAADTFDAPEALALEIRL 143
            PL L   G Y+VG +       I +VDF G  +  H    H+A    D P+  A ++R 
Sbjct: 68  IPLRLAGHGGYAVGATAHKGFIDIALVDFTGATIATH----HEAVAPID-PQGFARKVRR 122

Query: 144 AVAGLSESR---QARIAGVGLALPTPPIRSEPDH----DVLHRY--------LEAEFGLP 188
               L +       R+ G+G+A+P P +    D     DVL  +        L AE G P
Sbjct: 123 MTHELVDRHGLLGRRMLGLGVAVPGPSLSPAGDRWSVVDVLPNWRDAPLRDILSAEMGWP 182

Query: 189 VFVQNDITAAAGGE-SLFGTARQLQDFLFFYLGARLHCRLVLNHQIYNGNSPLSYDVGVL 247
           ++++ND   AA  E  L G  R     +   LG  +   ++++ ++  G   ++ ++G L
Sbjct: 183 LWIENDANTAAIAEYYLGGLLRDFGTIVVLLLGFGIGAGVIVDGRLMRGQYGVAGEIGCL 242

Query: 248 ---ALERRLPADSAMAEKLWGQDLS--------WPPLEATLADWQQACAENLIQLTQSLL 296
               L R  P D     +  G DLS              T+  W    AE L  ++ +  
Sbjct: 243 FPGHLPRPSPLDLLAMLRSNGCDLSSVADIDFHAADQAPTIDIWLDRAAEQLQMVSNTAF 302

Query: 297 QFIELRTVVLSSFVPAAICEALCRLVRQE--IPSVN-----AVVGRTSAAPKAVGAASLP 349
            +++   +VL+  +P+ I + L   + Q   + +V+       +     +P   GAA LP
Sbjct: 303 AWLDPGAIVLAGTLPSTILQGLADRLHQADLVTTVHHRRPPVRISNLHGSPITFGAALLP 362