Pairwise Alignments

Query, 357 a.a., ROK family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 410 a.a., transcriptional regulator, ROK family from Agrobacterium fabrum C58

 Score =  176 bits (445), Expect = 1e-48
 Identities = 117/400 (29%), Positives = 190/400 (47%), Gaps = 53/400 (13%)

Query: 4   APPNPLRIADRASGLNSLSVRSYNERLVLSLLLQNEATTRLEIGEKTGLSAQTISVIVRS 63
           AP  P    D + G N + VR+YNERLVLSL+ ++   ++ EI    GLSAQT+SVI+RS
Sbjct: 8   APQAPPTTMDMSGGANQIGVRAYNERLVLSLVRRHGGLSKAEISRLCGLSAQTVSVIMRS 67

Query: 64  LEQEGLVVRGEAQKGRVGPPTTPLMLNSEGAYSVGVSVGYHNTHIVVVDFIGNVQHHRVM 123
           LE++GL++RGE  +G+VG P+TP+ LN +  +S GV +G  +  +V++DF+G ++    +
Sbjct: 68  LEKDGLLIRGERLRGKVGQPSTPMRLNPDAVFSFGVKIGRRSVDLVLMDFVGRIR----L 123

Query: 124 PHKAADTFDAPEALALEIRLAVAGLSE-------SRQARIAGVGLALP-----------T 165
             +    +  PE +   +   + G+SE         + +IAGVG+A P            
Sbjct: 124 KLRKTYPYPMPEWI---LPFVIEGISELESKLSAVERQKIAGVGIAAPFELWNWAQEVGA 180

Query: 166 PPIRSEPDHDV-LHRYLEAEFGLPVFVQNDITAAAGGESLFGTARQLQDFLFFYLGARLH 224
           P    E   DV +   +      PVF+QND T+A G E +FG  +   DFL+ ++G+ + 
Sbjct: 181 PQAEMERWRDVDIRSEIANGISYPVFLQNDATSACGAELVFGAGQNYADFLYVFIGSFIG 240

Query: 225 CRLVLNHQIYNGNSPLSYDVG-------------------VLALERRLPADSAMAEKLWG 265
             +VLN  +++G +  +  +G                   +  LE  L         LW 
Sbjct: 241 GGVVLNSALFSGKTGTAGAIGPLPVQGQDGNTVQLLKIASIFVLENMLRERGIDPRPLWF 300

Query: 266 QDLSWPPLEATLADWQQACAENLIQLTQSLLQFIELRTVVLSSFVPAAICEALCRLVR-- 323
               W      L +W Q  A  L Q   +    I+  +V++    P  +   +    R  
Sbjct: 301 SPDEWIDFGEPLENWIQKTAAALAQAVIAAASIIDFSSVIIDGGFPDWVRTRIVSATRLA 360

Query: 324 ------QEIPSVNAVVGRTSAAPKAVGAASLPFSSRFMVN 357
                 Q +     V G   +  +A+G ASLP  SR++++
Sbjct: 361 LKHHDLQGVTLPEIVEGAVGSQARAIGGASLPLFSRYLID 400