Pairwise Alignments

Query, 358 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 318 a.a., D-ribose ABC transporter, substrate-binding component RbsB (from data) from Pseudomonas simiae WCS417

 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 57/244 (23%), Positives = 112/244 (45%), Gaps = 11/244 (4%)

Query: 75  HEAQAAADNDKRITKFILLDAGFDQKKQVADIEDLIAQKVDAIIVQPVTSTSANASIEKA 134
           ++ + AAD D  IT  I  +   D   Q+  +  +I  KV+AI++ P  S +    ++KA
Sbjct: 59  YQKEHAADFDM-ITNGIKNET--DTSAQIDIVNQMILAKVNAIVIAPADSKALVTVLKKA 115

Query: 135 VAAGIPVVLHTGRIESEAYTTE------IQGGAEHFGKVMGDFLVKELGGKGNIWVLRGL 188
             AGI VV    R++ +   ++      +        K++GD+L K+L     + ++ G+
Sbjct: 116 SDAGIKVVNIDNRLDPDVLKSKNLDIPFVGPDNRKGSKLVGDYLAKQLASGDKVGIIEGV 175

Query: 189 AGHPEDTNRYNGLKQSLEGTEIKIAAEEHGDWQYDKAKKVCETLYLSDPNVDGIWSSGAD 248
                   R  G K +++   +KI + + G+W+ D+ +KV   +    P++  + +   +
Sbjct: 176 PTTTNAQQRTAGYKDAMDAAGMKIVSTQSGNWEIDQGQKVASAMLSEYPDLKALLAGNDN 235

Query: 249 MTRACVDVFKQFGSPIPP-ISGEGNNGFFGQWIADGFKSISSEYSPAQGAA-GIRAAVAL 306
           M    V   +  G      + G  N       + DG    +++ + AQ A  GI+ A+ L
Sbjct: 236 MALGAVSAVRAAGKAGKVLVVGYDNIEAIKPMLQDGRVLATADQAAAQQAVFGIQNALKL 295

Query: 307 LEGK 310
           ++G+
Sbjct: 296 VKGE 299